Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5621g00008 ATGAGTGTTGAAGTAGAAGTAATCTCTAGAGAAATGGTGAAACCATCGTCTCCTACACCTCGACATCTTCGTCATTACCATCTCTCTTTCATCGATCAGATAACTCCCCAAATCAACAATTCTATGGTCTACTTCTTCACGGCTGATTCTGTCACAAACAAATTTAACGTCAACGAGGCTTCCGATGTTCTCAAGAAATCGTTGTCTCAAGTCTTAACTCACTACTATCCACTCGCCGGGAGACTCATGACAGACAACTTAGTGGTAGAGTGCAACGACGAGGGTGTCCCGTACATAGAAACCAAGGTCAGGTGCCGCCTCAGCCACGTCACCGACGACCCCTCTCCGGCCGACTTCAGTAAATTGCTTCCCTACGACATGGATGAAGTGGTGGACACAGTCCTAGGTGTCCAATTCAATGTCTTCGATTGTGGTGGAATAGCCGTCGGAGTAAGCCTCACCCACAAGATTGCCGATGCGCTGTCGCATTTCCAATTCATTAAGACCTGGGCCGCCGTAACACGCGGCGGACCAGAACCAGTCAGAACCCACTTCCAATCTTCCTCTCTTTTCCCGACAAAAGACTTGTCGGGATATGATCCGAATACACACATAGGACAGCACAAAGCCGTGGGCAAGCGATTCGCTTTTGAAGCATCCGTAATAGAATCTCTGAGAACAAAATATTCAAGAAAGCTCAGTGAAGGCCAAAAACTTCCTTCAAGAGTAGAAGTCTTATCAACTTTCCTATTCAACCGGTTTGTTGCAGCCACAAAAGAAGAGGGCGACAATAAGATTCATTTAGTGACATCCACAGTGAATCTACGCACAAGAATGGATCCTCCATTGCCAGAATATGCGTTCGGGAACTATTACTGGTACGTTCAAATGTTTCCAACGTTAGACAAGAAAGGAGAGAGCGACGACTTCTTTGGAAGACAGTTAAGAGAAGAGATAACCAAAGTGGACAACGATTTTATTGTGAAGCTTCGAGAAAGCAAAGAATGGAACCCTAATAGAGAAGATATGGCTAAAGCAATTGAGAAGGGTGAGTTGGTGCCTGTGGCCTTCACTTCACTGTGTAGGTTTCCCGTGTACGAGGTTGATTTTGGATGGGGTAATCCTACGTGGACAGGACCGCCTACGTGGAAATTCAAGAATGTAATTGTTTTTAAAGACACCAAGTCAGGTGGAGGCATTGAGGCGTACGTCAACTTGACGAAGGATGACATGGCTAAATTTGAACGTGATGAGGAGCTTCTTGCTCATGTACCAGTCTCCTCATCTACGAGCTCTACCAAGTCAAAGGGATATACTTTAGTAACTCTAAACGGACCTTCCCACTTATCACATCCAGCATTATAG 1365 0.4549 MSVEVEVISREMVKPSSPTPRHLRHYHLSFIDQITPQINNSMVYFFTADSVTNKFNVNEASDVLKKSLSQVLTHYYPLAGRLMTDNLVVECNDEGVPYIETKVRCRLSHVTDDPSPADFSKLLPYDMDEVVDTVLGVQFNVFDCGGIAVGVSLTHKIADALSHFQFIKTWAAVTRGGPEPVRTHFQSSSLFPTKDLSGYDPNTHIGQHKAVGKRFAFEASVIESLRTKYSRKLSEGQKLPSRVEVLSTFLFNRFVAATKEEGDNKIHLVTSTVNLRTRMDPPLPEYAFGNYYWYVQMFPTLDKKGESDDFFGRQLREEITKVDNDFIVKLRESKEWNPNREDMAKAIEKGELVPVAFTSLCRFPVYEVDFGWGNPTWTGPPTWKFKNVIVFKDTKSGGGIEAYVNLTKDDMAKFERDEELLAHVPVSSSTSSTKSKGYTLVTLNGPSHLSHPAL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5621g00008 454 PANTHER F21J9.9 6 422 - -
Pral5621g00008 454 Gene3D - 208 424 IPR023213 -
Pral5621g00008 454 Gene3D - 1 198 IPR023213 -
Pral5621g00008 454 Pfam Transferase family 4 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5621g00008 Pral-Chr5621 62971 64335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5621g00008 3 416 Monolignol Biosynthesis Gene Families AT5G48930 22.727 1.19e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5621g00008 K13065 - gmx:100801695 493.426