Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5621g00004 ATGGTCTATTTCTTCAAATCCGATGACGTCGCAAACAAATTTAACATCAACCAAGCTTCCAATCTTCTCAAGAAATCGTTGTCCCAAGTCTTGAGTCACTACTACCCACTCGCCGGAAGACTCATAACCACCAACTTAGTCGTGGATTGCAACGATGAGGGTGTCCCTTACGTAGAAACCAGAGTCAGGTGCCACCTCAGCACCGTCGTCGACAATCCATCTCCGGCCGACGTCAGGAAACTGCTTCCCTACGACATGGATGAAATCGTCGACACCGTCCTAGGTGTCCAATTCAATGTCTTCGATTGCGGCGGAATAGCCGTCGGAGTATGCCTCTCCCACAAGATCGCCGACGCGCTGTCGTATTTCCAGTTCATAAAGAGCTGGGCCGCCATGGCACGGGGCGAAGCAGAAAAAATCAGAACCCACTTCCAATCTTCCTCACTCTTCCCGCCAAAACATGTCGGGATACGACCCGAATTCTTTCATCGGTATGCACAAAGTCGTGGGAAAGCGGTTCGTATTTGA 528 0.5038 MVYFFKSDDVANKFNINQASNLLKKSLSQVLSHYYPLAGRLITTNLVVDCNDEGVPYVETRVRCHLSTVVDNPSPADVRKLLPYDMDEIVDTVLGVQFNVFDCGGIAVGVCLSHKIADALSYFQFIKSWAAMARGEAEKIRTHFQSSSLFPPKHVGIRPEFFHRYAQSRGKAVRI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5621g00004 175 PANTHER F21J9.9 1 154 - -
Pral5621g00004 175 Gene3D - 1 158 IPR023213 -
Pral5621g00004 175 Pfam Transferase family 2 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5621g00004 Pral-Chr5621 24133 24660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5621g00004 2 135 Monolignol Biosynthesis Gene Families AT5G48930 31.915 5.72e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5621g00004 K13065 - gmx:100801695 189.889