Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5621g00003 ATGATGGTGAACGTTCTAGAAGGCCACAAACAACCCCTTTCAAGAGTAGCAGCCTTATCAACTTTCCTCTGGACACGATTTATGGCGGCCACTGAGGAAGAAGAAGGGAGCAAAAAGATTCACTTAGTGGGATTCACAGCGAATCTTCGCCCAAGAATGGATCCTCCATTACCAGAATATGCGTTCGGCAACTATTCCTGGTATCTTCGAACTTCTCCGACGTTAGACGAACAAGGAGAGTGTAAGGACCTTGGAATACTGCTAAGAGAAGAGCTGAATAAGATCGACAAAGATTTTATTGTGAAGCTCCGAGAAAGCGGAGGATGGAACCTAGTAGAGAATAGAGAAGAGATTGTTAGAGCAATTGAGAAAGGAGAGACTGTTCTCTTAAGTTTCACATCATTGTGTAGGTTTCCAGTTTACGATGTTGATTTTGGATGGGGGAATCCAACTTTGGCAGTACCACCTGCGTGGAAATTCAAGAATTCGGTGTCTCTTAAAGATACCAAGTCAGATGGTGGCATTGAAGCCTATATCAGCTTGACCGAGGATGACATGGCTAAATTTGAACGTGACGTGGAACTCCTTGCTCATGTTTCTACCACGGGGTTGAAATAA 618 0.4385 MMVNVLEGHKQPLSRVAALSTFLWTRFMAATEEEEGSKKIHLVGFTANLRPRMDPPLPEYAFGNYSWYLRTSPTLDEQGECKDLGILLREELNKIDKDFIVKLRESGGWNLVENREEIVRAIEKGETVLLSFTSLCRFPVYDVDFGWGNPTLAVPPAWKFKNSVSLKDTKSDGGIEAYISLTEDDMAKFERDVELLAHVSTTGLK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5621g00003 205 Pfam Transferase family 10 195 - -
Pral5621g00003 205 PANTHER F21J9.9 11 199 - -
Pral5621g00003 205 Gene3D - 3 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5621g00003 Pral-Chr5621 12735 31678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5621g00003 50 191 Monolignol Biosynthesis Gene Families AT5G48930 25.658 3.71e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5621g00003 K13065 - gmx:100801695 208.764