Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5620g00032 ATGGAGACAAAACTTGAGCTCCTCCATGGAACAATTGAAGCCACCATCTTCAATGCTACTCCTCATGCACCAGCATTTCCCTTCAATTGTATTCGTGCAAATGGGAAACCTGCATACGTGACCATCAAGCTAGGCAAAAAGGTAGCAACGACGAGTCAAGAAAGAGATCGTGTTTGGAATCAAACCTTTCAGATCCCATGTGCTCACCCAGCAGATTCGATTATCATCCTCACATTGAAAACATCATGCTCCATATTGGGGAGATTTCATATTCAAGCTCAGAAGTTACTGAAGGAAGAAAGTTTAATCAATGGTTTCTTCCCTCTCCACATGGAAAATGGAAAACCTATTCCTCAACTCAAGTTAAGGTTTCTATTATGGTTCAAACCAGCAGGGCTTGAACCAAGTTGGGAAAAGCTGCTAAGGGATGGGGAATTTCATGGCTTAAGGGATGCGTCGTTTCCACAAAGGTCCAATTGTCAGGTCAAGCTTTACCATGATGCTCACCATTCTTTCACTTATCAACCTCCTTTTGATCATTGTGGACCTCCAGGAAGGCTATGGGAGGATGTGTACAAAGCCATTGAGGGTGCAAAGTACTTCGTTTATATTGCAGGGTGGTCCTTTAATCCTAAGATGGTTCTGGTCAGAGATCCTGAAACGGAAATCCCATATGCGAGAGGAGTAAAGCTTGGTGAGCTGTTAAAAAGGAAGGCAGAAGAAGGAGTGGCAGTGAGGGTGATGGTTTGGGATGATGAAACATCTTTGTCATTTATGAAGAACAAGGGTATGATGAATACTCATGATGAGGATGCTTTTGCATACTTCAAACATACGAAAGTTATATGCAGAAAGTGTCCCAGATTACACCATAAGTTCCCCACATTGTTTTCTCACCATCAGAAGACTATAACCGTTGATGCCAAAGCACCGAAATCTGTGAATGATAGAGAAATTATAAGCTTTGTTGGTGGCTTAGATTTGTGTGATGGCAGGTACGACACAGAGCAGCATTCATTGTTTCAAACACTAAATAGCGAATCCCATTGCTATGATTTCTATCAGACAAATATAGCAGGAGCTAGCCTTAACAAAGGAGGGCCAAGATCGCCTTGGCATGATGCTCATGCTTGTGTTATAGGTGGTGCTGCTTGGGATGTGTTAACAAATTTCGAGCAAAGATGGACAAAGCAGTGTGATCCTTCCCTTTTAGTGCCTGCAAGTGCCTTAGCAAACCTCATGCCCCAAACTTGTTCAAGCATTCCCATTGAGAGGAATTGGAAAGTTCAAGTATATAGGTCAATTGACCATATCTCTGCTTACCAGTTGTTTAGAAAGCTTACTGTGGAGAGGAGCATCCATGATGCTTATGTTGAAGCAATCAGGCGAGCTGATAGGTTTATATACATTGAAAACCAGTATTTCGTTGGGGGATGCCATTTGTGGGACAAAGACAGGCATAGTGGATGCATAAATTTGATTCCCATTGAGATAGCACTCAAGGTGGTGAGTAAGATTAAAGCAAAGGAGAGGTTTGCAGTGTATGTAGTGATTCCAATGTGGCCAGAAGGATTACCTGAAAGTGAAACAGTTCAGGAAATTCTGCATTGGACCAGAGAAACAATTGCAATGATGTATAGGTTGGTTGGGGAAGCAATACAAGAGAGCAGGGAAGTAGGGCACCCAAGAGACTACTTGAATTTCTTTTGCCTAGCAAATAGGGAACAGAAGGGAGAAGGGGAGTACATGCCACCACATTCTCCTCATCCTGAAACACAATATTGGAAGGCCCAAAAGAGCAGAAGGTTCATGGTGTATGTCCACTCCAAGCTCATGATAGTGGACGACCTGTACATGTTGATAGGGTCAGCCAACGTGAACCAGAGATCCATGGATGGGCAAAGAGACACCGAGATAGCCATAGGTTGCTACCAATCACAAGATGCGGATTCCAACAACCAAGCGATCAATCGTGGCGAGATTCACGCGTACAGGATGTCATTGTGGTACGAGCACAGTAGGTGCGGAGAGGAATGGTTGATGGAGCCGGAGAGTTTGGAATGCGTTCGGAAAATGCGATCGATCGGAGATCGGATGTGGGAAATCTACAGCGGCGAAGAAATTGTGGATATGGAAGGCATTCATCTGGTGAGCTACCCTTTGAAGGTGACGCGGGAAGGTTTGGTATTAGATGTGCATGAGTGTGAGGGTCGTTTTCCTGACACTGAATGTGCAGTGAAGGGGAAGAGATCGAAGGTGTTGCCTCCCATCTCCACTACTTAG 2283 0.442 METKLELLHGTIEATIFNATPHAPAFPFNCIRANGKPAYVTIKLGNXKVATTSQERDRVWNQTFQIPCAHPADSIIILTLKTSCSILGRFHIQAQKLLKEESLINGFFPLHMENGKPIPQLKLRFLLWFKPAGLEPSWEKLLRDGEFHGLRDASFPQRSNCQVKLYHDAHHSFTYQPPFDHCGPPGRLWEDVYKAIEGAKYFVYIAGWSFNPKMVLVRDPETEIPYARGVKLGELLKRKAEEGVAVRVMVWDDETSLSFMKNKGMMNTHDEDAFAYFKHTKVICRKCPRLHHKFPTLFSHHQKTITVDAKAPKSVNDREIISFVGGLDLCDGRYDTEQHSLFQTLNSESHCYDFYQTNIAGASLNKGGPRSPWHDAHACVIGGAAWDVLTNFEQRWTKQCDPSLLVPASALANLMPQTCSSIPIERNWKVQVYRSIDHISAYQLFRKLTVERSIHDAYVEAIRRADRFIYIENQYFVGGCHLWDKDRHSGCINLIPIEIALKVVSKIKAKERFAVYVVIPMWPEGLPESETVQEILHWTRETIAMMYRLVGEAIQESREVGHPRDYLNFFCLANREQKGEGEYMPPHSPHPETQYWKAQKSRRFMVYVHSKLMIVDDLYMLIGSANVNQRSMDGQRDTEIAIGCYQSQDADSNNQAINRGEIHAYRMSLWYEHSRCGEEWLMEPESLECVRKMRSIGDRMWEIYSGEEIVDMEGIHLVSYPLKVTREGLVLDVHECEGRFPDTECAVKGKRSKVLPPISTT 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5620g00032 761 SMART pld_4 604 631 IPR001736 GO:0003824
Pral5620g00032 761 SMART pld_4 296 333 IPR001736 GO:0003824
Pral5620g00032 761 SUPERFAMILY Phospholipase D/nuclease 423 689 - -
Pral5620g00032 761 Gene3D Endonuclease Chain A 175 417 - -
Pral5620g00032 761 SUPERFAMILY Phospholipase D/nuclease 146 410 - -
Pral5620g00032 761 PANTHER PHOSPHOLIPASE D 4 743 IPR015679 -
Pral5620g00032 761 Pfam Phospholipase D C terminal 679 750 IPR024632 -
Pral5620g00032 761 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Pral5620g00032 761 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Pral5620g00032 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Pral5620g00032 761 CDD PLDc_pPLD_like_2 446 648 - -
Pral5620g00032 761 Gene3D Endonuclease Chain A 418 665 - -
Pral5620g00032 761 PIRSF PLD_plant 3 761 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral5620g00032 761 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 37 127 IPR035892 -
Pral5620g00032 761 Gene3D C2 domain 28 128 IPR035892 -
Pral5620g00032 761 Pfam C2 domain 38 110 IPR000008 -
Pral5620g00032 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5620g00032 Pral-Chr5620 231464 235461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5620g00032 30 761 Phospholipase D Gene Family (Wang group) AT1G55180 62.584 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5620g00032 K01115 - gmx:100807431 1264.6