Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5620g00014 ATGGCCACAGTACCAGGGCAGCTCGTGTGGGAAATTGTGAAGAAGAACAACTCTTTCTTGGTGAAGGAGTTTGGTAGGGGGACTCAGAGCGTGCAGTTCAGTAAAGAGAGCAACAATCTCTACAACCTTAACTCTTTCAAGTACTCTGGTCTTGCAAACAAGAAAACTATTACTATTCAGCCTAGTGGCAAAGATCAATCTGTGCTGCTGGCAACGACCAAGACAAAGAAGCAGAACAAGCCAGCTGCATTGCTTCATAAGTCTGTCATGAAAAAGGAGTTCAGAATGATGGCAAACGCCATAAAAAACCAGGTGGCAGACAACTACTACAGGCCTGATCTTAAGAAGGCAGCCCTCGCGAGGTTGAGTGCTGTTCACAGGAGCCTCAAAGTGGCCAAGTCTGGTGTTAAAAAGAGGAACAGACAGGCTCTGAGGATTGCTGGTAGGAAGTGA 453 0.4658 MATVPGQLVWEIVKKNNSFLVKEFGRGTQSVQFSKESNNLYNLNSFKYSGLANKKTITIQPSGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRMMANAIKNQVADNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQALRIAGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5620g00014 150 Gene3D - 6 133 - -
Pral5620g00014 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Pral5620g00014 150 FunFam 60S ribosomal protein L28 5 133 - -
Pral5620g00014 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5620g00014 Pral-Chr5620 106573 108729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5620g00014 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.028 2.01e-75 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5620g00014 K02903 - gmx:100306153 272.707