Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5620g00003 ATGCAAAAGTTGGCATTACTTCAACTTTTGACTCTTGCAGTCCTTGTTCATTCCCAGAATCAATCAGGATTCGTCAGTATTGATTGTGGATTTGTGGATAAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTTCAGATTCCAACATCATATCCACTGGAATTAGTCGCAGCATATCATCTAAACATAAGACGCAGACCCTTAAAAGGCAGTTCTGGAATGTTCGAAGCTTCCCAGAAGGAACCAGGAACTGCTATACTGTTGCAGCTCCTCAAGGAAGGAGCAGAAAGTTCTTAGTGAGAGCCATGTTCATGTATGGAAACTATGATGGTGAAAACTCTCTGCCCAAGTTTGATATCTATCTTGGAGCTAAATGGTGGGACTCTTTGATGTTTCAGAATGCATCTGAGATAGTAACCAAAGAAATAATTTATGTTGCTTCATCAGATTATGTTCATGTTTGCCTTTTTAACACCAACAATGGCAAACCTTTCATATCAGTGTTGGAGCTAAGAGTTCTGGACAGCAATGCCTATCTCGTCAGCTCCCTGCAGCTCTTGGCTCGGTATGATATAGGGCTGCAGGATGGTGAATTAGTCAGGTATCCAGATGACATCTATGATCGAATATGGACACCTTTTAACTCAAAAGACTGGAGACAGATGAATACATCACTCCCTGTGGACCAAGGATCATCATCAACAGCATCATCATCCGACTTAATAACTTACCCTCCTTCCACTGTCATGAGAACAGCAGCAACTCCAGCAAATGTCAGCAACAAATTGGAATTTCGCTTCCAGCTTGGGCATAATGATTCCATATACAACGTATACTTGTACTTTGCTGAAATCCAGAAACTCCAAGCAAACCAAATCAGAGAATTTGACATATTCCTGAATGGAGACCTTTTAAATGCTGATATCAGTCCTTTGTACCTTAAAACCCTGTATTATACCTCAATAATAACTGAACCTTGGCTTGATGTTTGGATCAATACAACCGATAGATCAACTCTTCCTCCTCTTTTCAATGCCATTGAGATATATATGACTAAGGATCTCTCTCAGTCACAAACACAGCAAACAGATGTTGATGCAATCACGAACATCAAATCATCTTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCACGGGCATACTTGTGGGACGGTCTTAACTGCAGCTATGGTGGATCTGGCTCCCCAAGGATCACCTCCTTGAACTTATCGTCTGGTGGATTAACTGGAAACATAGCTCCAGACCTATCCAATTTGAAGTCGATTGAGTACTTGGATTTGTCAAACAACAATTTGGTTGGAGATGTACCTAGTTTCCTCTCTCAGTTGCAGTTCTTGAGGGTTCTAGAACTAGAAGGCAATCAACTATCAGGAACAATTCCTACAAAACTTATTGAGAGGTCAAAGAATGGATCACTTAAACTCAGTTTTGGCGGAAATCCAAATCTTTGCTCTTCAGAAGACTCATGTAAGAGTAATAAGGCAAAGTTCGTCATTCCGTTAGTGTCATCACTAGCTGGAGCTTTAATACTGTTGGCAGCCACAATTACTTTCTGCATTTCCAGAAGGAAAAAAACAGTGAAGCTGAGTGCTTATTCCAGAATAAAGAAGGAGCTAGGGCTGAAGAAGCAAGAATTCACTTATGCTGAAGTTTGTAGCATCACCAAGAACTTTGAAAAGGTTTTGGGAAAAGGAGCATTTGGAACAGTGTACCACGGCATCTCAAGCAACACTCAGGTTGCTGTCAAAATGCTCTCTCCCTCAGGTCAAGGATATCTGCAATTTCAGGCAGAGGCAAAACTTGCTAAAGTTCACCATAAACACTTGACTTCTCTGATAGGATATTGTGACGATGGCACCAACGTTGCTCTCATCTATGAGTATATGGCTAATGGCGACTTAGCCAAGCATTTATCAGAGAAAAATGTAAACATCCTGAACTGGAAACAACGGCTACAAATTGCAGTGGATGCCGCAGAAGGCTTGGAGTATCTGCATACGGGTTGTAAGCCACCGATTGTTCACAGAGATGTTAAGTCCAAAAACATCTTACTGAATGAATTTTTTCGTGGAAAAATAGCTGATTTTGGATTGTCAAAAATCTTTCGTGATGAAGATGATACGCATATATTTACTGTGATAGCTGGCACCCCAGGATATCTTGACCCCGAGTACAATATGTCAAACAAGTTGAACGAAAAAAGTGATGTTTATAGCTTTGGGATTGTTCTTCTTGAGATAATTACAGGACAACCTGCCATAGCCAAGACTGAAGAAAAACCTCACATAGTTCAGTGGGTTAATGTCATGCTAGCTGAAAGCAAGGTTGCAGATATTATCGATTCAAGATTAGAAGGGAACTTTGATATTGATTCTGCAACAAAAGCACTGGATACTGCAATGGCTTCTGTGGCACCTTCTTCCCTAAACAGGCCAACAATGAGTCATGTAGTGATGGAATTGAGACAATGTTTGGCTATGGAGATAGCTCGTGGAAGTCAAAGTCAAATTGATTACTCATTTGGTGGAATCAGTGGAGTGAGTTCTTTGGCTAGATAG 2595 0.4077 MQKLALLQLLTLAVLVHSQNQSGFVSIDCGFVDKPSYTDETTSIYYTSDSNIISTGISRSISSKHKTQTLKRQFWNVRSFPEGTRNCYTVAAPQGRSRKFLVRAMFMYGNYDGENSLPKFDIYLGAKWWDSLMFQNASEIVTKEIIYVASSDYVHVCLFNTNNGKPFISVLELRVLDSNAYLVSSLQLLARYDIGLQDGELVRYPDDIYDRIWTPFNSKDWRQMNTSLPVDQGSSSTASSSDLITYPPSTVMRTAATPANVSNKLEFRFQLGHNDSIYNVYLYFAEIQKLQANQIREFDIFLNGDLLNADISPLYLKTLYYTSIITEPWLDVWINTTDRSTLPPLFNAIEIYMTKDLSQSQTQQTDVDAITNIKSSYGIKRNWQGDPCTPRAYLWDGLNCSYGGSGSPRITSLNLSSGGLTGNIAPDLSNLKSIEYLDLSNNNLVGDVPSFLSQLQFLRVLELEGNQLSGTIPTKLIERSKNGSLKLSFGGNPNLCSSEDSCKSNKAKFVIPLVSSLAGALILLAATITFCISRRKKTVKLSAYSRIKKELGLKKQEFTYAEVCSITKNFEKVLGKGAFGTVYHGISSNTQVAVKMLSPSGQGYLQFQAEAKLAKVHHKHLTSLIGYCDDGTNVALIYEYMANGDLAKHLSEKNVNILNWKQRLQIAVDAAEGLEYLHTGCKPPIVHRDVKSKNILLNEFFRGKIADFGLSKIFRDEDDTHIFTVIAGTPGYLDPEYNMSNKLNEKSDVYSFGIVLLEIITGQPAIAKTEEKPHIVQWVNVMLAESKVADIIDSRLEGNFDIDSATKALDTAMASVAPSSLNRPTMSHVVMELRQCLAMEIARGSQSQIDYSFGGISGVSSLAR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5620g00003 864 ProSitePatterns Protein kinases ATP-binding region signature. 574 595 IPR017441 GO:0005524
Pral5620g00003 864 CDD STKc_IRAK 574 833 - -
Pral5620g00003 864 SUPERFAMILY L domain-like 364 477 - -
Pral5620g00003 864 Pfam Malectin-like domain 27 353 IPR024788 -
Pral5620g00003 864 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 641 846 - -
Pral5620g00003 864 SMART serkin_6 568 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5620g00003 864 SUPERFAMILY Protein kinase-like (PK-like) 555 833 IPR011009 -
Pral5620g00003 864 Gene3D Transferase(Phosphotransferase) domain 1 641 852 - -
Pral5620g00003 864 PANTHER OS07G0107800 PROTEIN-RELATED 25 837 - -
Pral5620g00003 864 FunFam Leucine-rich repeat receptor-like kinase 365 498 - -
Pral5620g00003 864 Pfam Protein tyrosine and serine/threonine kinase 570 778 IPR001245 GO:0004672|GO:0006468
Pral5620g00003 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 685 697 IPR008271 GO:0004672|GO:0006468
Pral5620g00003 864 Gene3D Ribonuclease Inhibitor 367 490 IPR032675 -
Pral5620g00003 864 Gene3D - 204 355 - -
Pral5620g00003 864 ProSiteProfiles Protein kinase domain profile. 568 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5620g00003 864 Gene3D Phosphorylase Kinase; domain 1 550 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5620g00003 Pral-Chr5620 45708 50922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5620g00003 11 862 Receptor kinase-like Gene Family AT2G19210 47.866 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral5620g00003 Malectin_like 3.6e-100 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5620g00003 - - gmx:100778537 1136.32