Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5619g00002 ATGGGAATGTCAAAGAGCTTCTCTTTTCTCGTAGGTTGTCTGGTTTTTGTAGTTCTGGTTCAGTCTCAGGATCAATCAGGATTCATAAGCATAGACTGTGGGGCACCTGCCAAGTCCAACTACACTGAGAAGACAACAGGCATACATTACATATCAGATGAGGAGTTCATAGACTCTGGAGTGAGTAAATCGATAACCAATGATATCCAAAGTACATATCAACGGCAAGTTTGGAACCTGAGAAGTTTTCCTCAAGGACCAAGAAACTGTTACAGAATAAACATCAAAAGTGGATCTAAATATCTGATCAGGGCTACTTTTGTGTACGGGAATTATGATGGCGGGAATGATTTACCGAGTTTTGATCTTCATCTTGGGCCTAACTTGTGGAAGACAGTGAAAATAACCAATTCATCATCTGAAGTAGTCCCTGAGATCATACATGTTCCATCATTAGATTACATTCAACTCTGTCTGGTTGACACAGGCTCTGGAACCCCATTTATCTCTGCTATAGAATTGAGGACTTTGGTGGGCAGTATTTATGATATCCACTCAGGAATCTTGTCACTTGCCCAGAGGTTGGATTTAGGCTCAACCAGCAACAAAACATACAGGTATAGTTATGATGCTTATGATCGAGGCTGGGGATATTTCTATCACCAAAACTGGACACAAATTAATGCTTCAATTTCTGAAAATTCCTTATTTCAAAATTATTACAATCCACCAACCATTGTTATGAGTAATGCTGCGACACCAGTAAATGAAAGTGCTCCAATGCAAGCACACTGGGAGCTAGAAGACGCAACAGACCAAGCGTATGTATACATGCATTTTTTAGAGCTTCAAGTTTTAGAAAAGAATCAGACAAGATCATTCAATATTACCATCAATGGTAATTTTCTTGCAAATGTTGTCCTTCCGTACCAAGTCATATCCACTGTATTCAACATCACGAGTGGAGAAAAAATTGAAATTTTGCTTCAGAAGACCGAGAATTCAACCCTTCCACCTATCCTCAATGCTCTTGAAATTTATACATTTAAAGAATTTTCGCAATCAGAAACAGAGCAAGAAGATGTTGATGCAATCACAACAATCAAGTCTTCTTATGGGGTAGCAAGAAATTGGCAAGGTGATCCATGTAGTCCTAAGGCCTACGTTTGGGAAGGTCTAAATTGTACTTATAATGGCAAGAATTCTCCTAGAATCGCAGCCCTGGATTTGTCTTCAAGTGGATTGAAAGGAAACATACATCCTTCCATCTCAAAGCTCACCATGCTGGAGAAGTTGGATTTATCAAACAACAGCTTAAATGGAGCAGTGCCTAATTCTCTGGCTCAACTACAGAACCTCAAGATCTTAAACCTGGAGAACAACAACTTGACAGGTAGAGTTCCCTCTAATCTGCTTGAGAAATCAAAGAAAGGTACCCTGTCGCTAAGTGTTGGACAGAATCCATATCTATGTGAATCTCCTTCGTGCAACAACAACGAAAAGAACAATGTTACTATTCCCATAGTAGTATCAATTGTTGGAGCTCTAATCCTTCTGGCAGTTGTGGCAATCATATTTTTTACCCTTAAAAGAAGACAACAAAGAGGAACAGCTCCAATTGAGACCTCACAGAAAGTTGAAAAGGTTGAAGAACAAAAAGGCACATCTCTGGAGGCCATAAGCAGACAATACTCATATTCTGATGTCCACAAAATAACCAATAACTTCGGTATAATTCTCGGAAAAGGCGGCTTTGGAGCAGTTTATTTGGGTTACGTTGAGGAAACTCCTGTAGCAGTTAAAATGCTCTCTTCATCATCCGTTCAAGGTTATCAACAATTCCAAGCCGAGGTTAAACTTTTAATGAGAGTTCATCACAGAAATCTTACTTCCCTTGTTGGGTATTGCAATGAAAAAACCCATAAAGGGCTCATATATGAGTATATGGCTAATGGTAACTTACAAGATTACCTTTCAGGAAAAAGCAGCAACTCAAAGTTCTTGACTTGGGAAGACAGACTTTGTATAGCATTGGATGCGGCACTAGGGTTGGAGTATTTGCATAATGGATGTAAGCCACCTATAATCCATAGAGATGTAAAATCTTCAAACATCTTGCTGAATGAAAAATTCAAAGCAAAAATAGCTGACTTTGGCCTATCTAAAACCATCTTAACTGATGATGGAACTCATGTATCAACTGTTGTAGCAGGAACTCCTGGTTATTTAGATCCTGAGTACTATATAACAAGCAGATTGACAGAGAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTTTCGAGATAATCACAAGTCAGGCAGCCATATCTAGAAACCATGAGAGAACTCACATAAGTCAATGGGTTAGCTCCATGGTTGCTAAAGGAGATATAAAGGCCGTTGTTGACTCAAGACTAAGTGGAGACTTTGATAGTAACTCCGCTTGGAGAGTTGTGGAAATGGCAATGACTTGTGTGTCTCCAAAACCCAACAACAGGCCAACCATGAGTGAGGTAGTTAATGAACTAAAGGAGTGTTTGGCAACAGAAGTAGCCAGAACCAACCACAGTAGTGGTGCAGATATGGGAGACTCAGATGAATTAGGGTCCTTGAATATGACAATAGAATCCTCTCCCTTGGTCAGGTAG 2649 0.3952 MGMSKSFSFLVGCLVFVVLVQSQDQSGFISIDCGAPAKSNYTEKTTGIHYISDEEFIDSGVSKSITNDIQSTYQRQVWNLRSFPQGPRNCYRINIKSGSKYLIRATFVYGNYDGGNDLPSFDLHLGPNLWKTVKITNSSSEVVPEIIHVPSLDYIQLCLVDTGSGTPFISAIELRTLVGSIYDIHSGILSLAQRLDLGSTSNKTYRYSYDAYDRGWGYFYHQNWTQINASISENSLFQNYYNPPTIVMSNAATPVNESAPMQAHWELEDATDQAYVYMHFLELQVLEKNQTRSFNITINGNFLANVVLPYQVISTVFNITSGEKIEILLQKTENSTLPPILNALEIYTFKEFSQSETEQEDVDAITTIKSSYGVARNWQGDPCSPKAYVWEGLNCTYNGKNSPRIAALDLSSSGLKGNIHPSISKLTMLEKLDLSNNSLNGAVPNSLAQLQNLKILNLENNNLTGRVPSNLLEKSKKGTLSLSVGQNPYLCESPSCNNNEKNNVTIPIVVSIVGALILLAVVAIIFFTLKRRQQRGTAPIETSQKVEKVEEQKGTSLEAISRQYSYSDVHKITNNFGIILGKGGFGAVYLGYVEETPVAVKMLSSSSVQGYQQFQAEVKLLMRVHHRNLTSLVGYCNEKTHKGLIYEYMANGNLQDYLSGKSSNSKFLTWEDRLCIALDAALGLEYLHNGCKPPIIHRDVKSSNILLNEKFKAKIADFGLSKTILTDDGTHVSTVVAGTPGYLDPEYYITSRLTEKSDVYSFGVVLFEIITSQAAISRNHERTHISQWVSSMVAKGDIKAVVDSRLSGDFDSNSAWRVVEMAMTCVSPKPNNRPTMSEVVNELKECLATEVARTNHSSGADMGDSDELGSLNMTIESSPLVR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5619g00002 882 Pfam Malectin-like domain 31 348 IPR024788 -
Pral5619g00002 882 CDD TM_EGFR-like 505 535 - -
Pral5619g00002 882 SUPERFAMILY L domain-like 365 473 - -
Pral5619g00002 882 Pfam Leucine rich repeat 404 463 IPR001611 GO:0005515
Pral5619g00002 882 PANTHER OS07G0107800 PROTEIN-RELATED 29 847 - -
Pral5619g00002 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Pral5619g00002 882 ProSitePatterns Protein kinases ATP-binding region signature. 580 601 IPR017441 GO:0005524
Pral5619g00002 882 MobiDBLite consensus disorder prediction 854 882 - -
Pral5619g00002 882 SMART serkin_6 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5619g00002 882 FunFam Leucine-rich repeat receptor-like protein kinase 545 648 - -
Pral5619g00002 882 SUPERFAMILY Protein kinase-like (PK-like) 558 843 IPR011009 -
Pral5619g00002 882 FunFam Leucine-rich repeat receptor-like kinase 360 493 - -
Pral5619g00002 882 Gene3D Transferase(Phosphotransferase) domain 1 649 864 - -
Pral5619g00002 882 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 856 - -
Pral5619g00002 882 Gene3D Ribonuclease Inhibitor 362 483 IPR032675 -
Pral5619g00002 882 Gene3D Phosphorylase Kinase; domain 1 556 648 - -
Pral5619g00002 882 ProSiteProfiles Protein kinase domain profile. 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5619g00002 882 Pfam Protein tyrosine and serine/threonine kinase 578 843 IPR001245 GO:0004672|GO:0006468
Pral5619g00002 882 CDD STKc_IRAK 580 845 - -
Pral5619g00002 882 PRINTS Leucine-rich repeat signature 429 442 - -
Pral5619g00002 882 PRINTS Leucine-rich repeat signature 450 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5619g00002 Pral-Chr5619 8439 12851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5619g00002 1 882 Receptor kinase-like Gene Family AT1G51800 49.059 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral5619g00002 Malectin_like 5e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5619g00002 - - qsa:O6P43_027684 1083.17