Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5618g00049 ATGCTTCCGAGACCAGCTTTGGCTCAACACTTACCCTCTCGATCGCAACCTAGTGTTCGATTATTTCGCCTTATCCCCCTTCTACGACTGGACCTGCAACAACGAACAACTTCGAAAATGACGGGCATAGAGTATATGCTTAGTGAAGTCATGGAACCGCACCTTTTTGTTATTCGCAAGCAAAAGAGAGATGGCCCTGAGAAAGTTACGCCGATGCTAGCTTATTACATCTTGGATGGTTCAATATACCAAGCACCACAGCTATGCAATGTTTTTGCTGCTCGAATTGGAAGGGCACTATATCATATACAGAAGGCTTTTAGTACAGCTGCATCGAAATTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGCCTGCAGTGCCAGAAGCGAAGGCTGATAAAGAGACAATTAACATAAAGGAAGTTATGCGGGTGGATCACATTCTTGCATCCCTACAGCGTAAGCTGCCTCCAGCTCCACCTCCGCCACCATTTCCTGAAGGCTACACTCCGCCTCCAACTGGGGAAACTGAGAAAGCACCGGAAGGTCAAGAAGCAGGAGAGTCTCAAGCTCCTCTTATTGATCCTATAATTGATCAAGGACCTGCAAAGAGGATCAAAGTTTGA 630 0.4571 MLPRPALAQHLPSRSQPSVRLFRLIPLLRLDLQQRTTSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYHIQKAFSTAASKLEKIGYVDSENEPAVPEAKADKETINIKEVMRVDHILASLQRKLPPAPPPPPFPEGYTPPPTGETEKAPEGQEAGESQAPLIDPIIDQGPAKRIKV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5618g00049 209 PANTHER MED-6-RELATED 36 208 IPR007018 GO:0003712|GO:0006357|GO:0016592
Pral5618g00049 209 Gene3D Mediator complex, subunit Med6 9 110 IPR038566 -
Pral5618g00049 209 MobiDBLite consensus disorder prediction 154 209 - -
Pral5618g00049 209 MobiDBLite consensus disorder prediction 156 172 - -
Pral5618g00049 209 Pfam MED6 mediator sub complex component 36 112 IPR007018 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5618g00049 Pral-Chr5618 372465 375656 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Pral5618g00049 Med6 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5618g00049 K15128 - qsa:O6P43_027688 263.848