Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5618g00048 ATGGCGACACCTCCGATGGCGGGAAACGCATTGTTCGACGGAGCTGCGCCGCCGCCGCCACAACCTCCGGGAACTGACATGACAGGAATATGCTTCCGAGACCAGCTTTGGCTCAACACTTACCCTCTCGATCGCAACCTAGTGTTCGATTATTTCGCCTTATCCCCCTTCTACGACTGGACCTGCAACAACGAACAACTTCGTATGCGCTCAATCCACCCTCTTGATCCCTCTCAATTATCGAAAATGACGGGCATAGAGTATATGCTTAGTGAAGTCATGGAACCGCACCTTTTTGTTATTCGCAAGCAAAAGAGAGATGGCCCTGAGAAAGTTACGCCGATGCTAGCTTATTACATCTTGGATGGTTCAATATACCAAGCACCACAGCTATGCAATGTTTTTGCTGCTCGAATTGGAAGGGCACTATATCATATACAGAAGGCTTTTAGTACAGCTGCATCGAAATTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGCCTGCAGTGCCAGAAGCGAAGGCTGATAAAGAGACAATTAACATAAAGGAAGTTATGCGGGTGGATCACATTCTTGCATCCCTACAGCGTAAGCTGCCTCCAGCTCCACCTCCGCCACCATTTCCTGAAGGCTACACTCCGCCTCCAACTGGGGAAACTGAGAAAGCACCGGAAGGTCAAGAAGCAGGAGAGTCTCAAGCTCCTCTTATTGATCCTATAATTGATCAAGGACCTGCAAAGAGGATCAAAGTTTGA 759 0.4783 MATPPMAGNALFDGAAPPPPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDPSQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYHIQKAFSTAASKLEKIGYVDSENEPAVPEAKADKETINIKEVMRVDHILASLQRKLPPAPPPPPFPEGYTPPPTGETEKAPEGQEAGESQAPLIDPIIDQGPAKRIKV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5618g00048 252 PIRSF MED6_meta/plant 15 252 IPR016820 GO:0003712|GO:0006357|GO:0016592
Pral5618g00048 252 MobiDBLite consensus disorder prediction 198 252 - -
Pral5618g00048 252 PANTHER MED-6-RELATED 8 251 IPR007018 GO:0003712|GO:0006357|GO:0016592
Pral5618g00048 252 MobiDBLite consensus disorder prediction 1 25 - -
Pral5618g00048 252 MobiDBLite consensus disorder prediction 199 215 - -
Pral5618g00048 252 Pfam MED6 mediator sub complex component 30 155 IPR007018 GO:0003712|GO:0006357|GO:0016592
Pral5618g00048 252 FunFam Mediator of RNA polymerase II transcription subunit 6 24 153 - -
Pral5618g00048 252 Gene3D Mediator complex, subunit Med6 24 153 IPR038566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5618g00048 Pral-Chr5618 372465 375724 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Pral5618g00048 Med6 6.5e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5618g00048 K15128 - jre:109007876 397.512