Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5618g00046 ATGGCTGGGGAACTCAGATGCAACTGGGCTTGGCTCTCTTTGTTATGGTTTGTCTCTGCATCAGTATTTGCAATTCAGGAAGTTAATGGGAAATCCATAGTTCTGGCTAAAGAGAAGAACTCTGCACATCACCAACAGGCCAGAAGGAAATTAGATGATGTGGGTGGTTCTATTGACATTGACTGTGGCCTAATTGATGAGAATGACTATACTGATCGAAAAACTCAGATACTCTACACTACAGATTCAAAGTTCATTGACACTGGAGAAAACCGGGTGATATCAATTGAGTTCATTTCTGAAAATCTTGAAAGAATACTTAGAAATGTAAGAAGCTTTCCTGAGGGTAAGAGGAATTGTTACACTCTAAAACATCCAGAAGGTAGAAATACTGTTTACTTGTTGAGAGCTTCTTTCATGTATGGCAACTATGATGCTCTGAATCAGCCGCCCAAGTTTGAGCTTTATATTGGAGTTAATTTGTGGGACACTGTGACATTCGACAATGCCTCCCATATTGTAATAAAGGAGATTTTACATGTGCCACCTATGGATGTTGTACATGTTTGCTTACTGAACACTGATGAAGGAACTCCTTTTATATCAGCATTGCAGATGAGGCATCTTCACAATTCCGTTTATACTAACAAATCTCGAACCTTAGCTCTATGTAAACGTCTTGACTTTGGTTCAACAACCAATGAAATAGTGAGGTTTAAAGAAGATGCCTATGATAGAATTTGGTATCCTTACAATTTACCTCATTGTGAGCCATTGAGTACTAACCTGACCATTGATTCCCTGAAAAATACATATCGGCTACCGTCAACAGTAATGAGAACTGCTGTAACACCAAGTAATGGTGGCGAACCCCTGGAAGTTCAGTTTGAAACTGGTGATTCTATTTCAAAGTTCTATGTTTATATGCACTTTGCTGAGATTAAGGAGCTCCGTGAAAATGAACACAGAGAATTCAGCATTACATTGAATGGAAAATTGTTGGATGAGTCTGAAGATCTTGTAGTCCTTAATTACTTAGACCCGACCACAATTCATAATCCACAGCCCATCACAGGGCCCAACCTTCGGCTCTCTTTGAACAAGAAAGAAAATTCCACCCTTCCTCCCATTCTCAATGCAATGGAGATTTACTTTGAGAAAGATTCATATCAGGAACCTACAGACCAAGAAGATGTTAATGCTATCATGGACATCAAACAAGCCTACACTATTAAGTCGTGGCAAGGAGATCCTTGTGCACCCAGGTACTATCCCTGGGATGGACTTAACTGCAGTTACAATGGATATGATGCACCAAGAATAATTGAATTAAATCTACCCTCCAGCAACTTGTCAGGAACAATAAGTCAATCATTTTCCATGCTGAAATCTTTAGAATATTTGGATTTATCAAATAATAGTTTAACTGGGTCACTTCCTGATTTTTTCATCCATTTGCAACACTTGAAGACTCTAAATTTATCAGGAAACAGGCTCTCTGGTGAAATTCCATCAGCTCTCAGGGAAAGATCAGATAATGGGTCACTTCTGTTGAGTGTGGATGGGAATCCTGACCTTTGTCTGAAAGCTCCGTGCAAAGAGGATAAGAGTTCTTTTCCACTGCATGCAGTCATAGCCATTCTTTCATCAGTAGTCTTTTTAATTGCACTGGCTATTGTAGTCAGCATTATTTGGAGAAGGAAATCCAGCAAAAAACCAGCAAATCAGCTGGTGACATCGAATGAGGAAGTTGTGCTGAAGTCAAGCAATGCAAGATTCACATACTCCCACATAGTAGATATCACCAATAACTTCGAGAAAATGATTGGAAAAGGAGGATCTGGAGCTGTTTATCATGGCTCCTTATCTGATGACACGCAAGTTGCTGTCAAACTGCTCTCATCACCAGGAAGCTGTAAGCAGTTTCAGACAGAGGCAGAACTCTTAATGCGACTTCATCATAGAAACTTGGCTTCCTTTCTTGGATATTGTAATGAAGGCGGACACACTGCAATCATATACGAGTTCATGGCTCATGGGAACTTAGAGAAGTGTCTTTCAGGTTCAATGAAAGAATTATCAAGTTGGAAAAACAGGATTCAGATAGCAGTCGACGCCGCTCAAGGACTTGAGTATTTGCATCATGGCTGCAAGCCTCCTCTAGTTCACAGGGACATAAAGACATCAAACATTTTGCTGAATGAGAAAATGCAAGCAAAAGTTGCAGATTTTGGGTTCTCAAAGTCCTTTTCAACTGAAAGCCAAAGCCATATGTCGACAGAAGTCATTGGGACATTCGGATACCTGGACCCAGAATACTACTCAGCCAACAGGCTTACTGAGAAAAGTGATGTTTATAGCTTTGGCATTGTGCTTCTAGAGCTTGTTACAGGGCAACGAGCAATAATAAAAGGTCAAGAGAACACTCACATTGTGAATTGGGTTACCCCTTTTGTGAAAAGAGGAGATCTGCAACAAATTGTGGATTCAAGGTTGCAGGGAGATTTTGATTTTGGTTCTATGTGGAAGGCTGTGGAAGTAGCAATATCTTGTGTGTCTCCAACCGCTAGTGAAAGACCATCAATGAATTATGTTGTCCCAGAATTAAAAGAAAGCTTAGAAATGGAAGCAGCTCGTAAACAAAGGTGGGGTACAGATGGAAGAATTCTTAAATCAAACAGCTCATTCGACACCCATGTTGTTGATCTTGAAGCTGCCTCTGGTCCAGAGGCAAGATAG 2739 0.4027 MAGELRCNWAWLSLLWFVSASVFAIQEVNGKSIVLAKEKNSAHHQQARRKLDDVGGSIDIDCGLIDENDYTDRKTQILYTTDSKFIDTGENRVISIEFISENLERILRNVRSFPEGKRNCYTLKHPEGRNTVYLLRASFMYGNYDALNQPPKFELYIGVNLWDTVTFDNASHIVIKEILHVPPMDVVHVCLLNTDEGTPFISALQMRHLHNSVYTNKSRTLALCKRLDFGSTTNEIVRFKEDAYDRIWYPYNLPHCEPLSTNLTIDSLKNTYRLPSTVMRTAVTPSNGGEPLEVQFETGDSISKFYVYMHFAEIKELRENEHREFSITLNGKLLDESEDLVVLNYLDPTTIHNPQPITGPNLRLSLNKKENSTLPPILNAMEIYFEKDSYQEPTDQEDVNAIMDIKQAYTIKSWQGDPCAPRYYPWDGLNCSYNGYDAPRIIELNLPSSNLSGTISQSFSMLKSLEYLDLSNNSLTGSLPDFFIHLQHLKTLNLSGNRLSGEIPSALRERSDNGSLLLSVDGNPDLCLKAPCKEDKSSFPLHAVIAILSSVVFLIALAIVVSIIWRRKSSKKPANQLVTSNEEVVLKSSNARFTYSHIVDITNNFEKMIGKGGSGAVYHGSLSDDTQVAVKLLSSPGSCKQFQTEAELLMRLHHRNLASFLGYCNEGGHTAIIYEFMAHGNLEKCLSGSMKELSSWKNRIQIAVDAAQGLEYLHHGCKPPLVHRDIKTSNILLNEKMQAKVADFGFSKSFSTESQSHMSTEVIGTFGYLDPEYYSANRLTEKSDVYSFGIVLLELVTGQRAIIKGQENTHIVNWVTPFVKRGDLQQIVDSRLQGDFDFGSMWKAVEVAISCVSPTASERPSMNYVVPELKESLEMEAARKQRWGTDGRILKSNSSFDTHVVDLEAASGPEAR 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5618g00046 912 CDD STKc_IRAK 609 871 - -
Pral5618g00046 912 Pfam Malectin-like domain 60 384 IPR024788 -
Pral5618g00046 912 FunFam Leucine-rich repeat receptor-like kinase 397 529 - -
Pral5618g00046 912 Gene3D Phosphorylase Kinase; domain 1 576 676 - -
Pral5618g00046 912 ProSiteProfiles Protein kinase domain profile. 603 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5618g00046 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Pral5618g00046 912 Pfam Protein tyrosine and serine/threonine kinase 605 867 IPR001245 GO:0004672|GO:0006468
Pral5618g00046 912 Gene3D Ribonuclease Inhibitor 398 520 IPR032675 -
Pral5618g00046 912 PRINTS Leucine-rich repeat signature 465 478 - -
Pral5618g00046 912 PRINTS Leucine-rich repeat signature 486 499 - -
Pral5618g00046 912 ProSiteProfiles Leucine-rich repeat profile. 464 486 IPR001611 GO:0005515
Pral5618g00046 912 PANTHER OS07G0107800 PROTEIN-RELATED 58 873 - -
Pral5618g00046 912 Gene3D Transferase(Phosphotransferase) domain 1 677 893 - -
Pral5618g00046 912 SUPERFAMILY L domain-like 413 507 - -
Pral5618g00046 912 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 677 882 - -
Pral5618g00046 912 SMART LRR_typ_2 486 510 IPR003591 -
Pral5618g00046 912 SMART LRR_typ_2 462 485 IPR003591 -
Pral5618g00046 912 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Pral5618g00046 912 Pfam Leucine rich repeat 443 499 IPR001611 GO:0005515
Pral5618g00046 912 SMART serkin_6 603 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5618g00046 912 SUPERFAMILY Protein kinase-like (PK-like) 582 867 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5618g00046 Pral-Chr5618 354690 359915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5618g00046 50 912 Receptor kinase-like Gene Family AT2G19210 46.101 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral5618g00046 Malectin_like 2.8e-106 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5618g00046 - - pcin:129288548 1583.16