Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5618g00031 | ATGGATGTGAGGCCAAGAAATGAGGAGGTTTCTCCTCAGCTGCTAGATTTGATCCCAAAGGATCAAAAAGAATGGCATGTGAACGACACAGACGAAGGAGGAAGAACCCAAAACAACAGCAGCAACAACAACAAGAACAAAGACAAGTCTTGTTGTGAGGAGAGAAAACTTGAGCTCAGACTTGGCCCACCTGGTGAAGATTGGTCTCTCAATCATGATACCACCAAAAACAGTGATGAGTCTCTACTCTCTCTTGGCTACTTCTCTCAGCAAACTCAGAAAATCTCTGACTCTCCATGGGCTTCTTCGAAGGCTTCATCATTTCTTCAGTTCCCATCATGCAGCCCTCAGAGTATGCCAGAGAAGAAAGCTTTCTCATCATCCTCTTCTGCCAATCCAGCTGCGCCCTCTAATATCTCTCAGAAAAGAACTGCTCCTGGGCCAGTAGTGGGTTGGCCTCCAATTCGTTCATTTAGGAAGAACCTTGCAAGCAACAGCACTTCTAAGACAGCTCATGAGACACAGCAGCAGCATGATGTTGCAGACAAGGTTGCTGGGAAGAAACCTGTTGTTGACAACGTTGGTAAAGGTTTGTTTGTGAAGATCAATATGGATGGAGTTCCCATCGGGAGAAAAGTGGACCTTAGTGCTTATGACAGCTATGAAAAACTCTCCTCTGCAGTTGATGAACTCTTCAGATGCCTCCTAGCTGCTCAAAGAGATTCCTCTGTTGGAGGAATCCAGAACAAGGAAGAGGAAGAAAAAGCTATCACAGGTTTATTGGACGGGAGTGGGGAATATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTCGCTGGGGACGTGCCATGGCACATGTTCGTATCAACTGTGAAGAGGCTGCGGGTGTTGAAGAGTTCTGAGCTTTCTGCTTTTACCCTTGGTAACAAGCAAGACAAGAAAACCACTTGA | 957 | 0.4577 | MDVRPRNEEVSPQLLDLIPKDQKEWHVNDTDEGGRTQNNSSNNNKNKDKSCCEERKLELRLGPPGEDWSLNHDTTKNSDESLLSLGYFSQQTQKISDSPWASSKASSFLQFPSCSPQSMPEKKAFSSSSSANPAAPSNISQKRTAPGPVVGWPPIRSFRKNLASNSTSKTAHETQQQHDVADKVAGKKPVVDNVGKGLFVKINMDGVPIGRKVDLSAYDSYEKLSSAVDELFRCLLAAQRDSSVGGIQNKEEEEKAITGLLDGSGEYTLVYEDNEGDRMLAGDVPWHMFVSTVKRLRVLKSSELSAFTLGNKQDKKTT | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5618g00031 | 318 | MobiDBLite | consensus disorder prediction | 47 | 62 | - | - | |
Pral5618g00031 | 318 | Gene3D | - | 192 | 312 | - | - | |
Pral5618g00031 | 318 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 54 | 304 | IPR003311 | GO:0005634|GO:0006355 | |
Pral5618g00031 | 318 | MobiDBLite | consensus disorder prediction | 119 | 144 | - | - | |
Pral5618g00031 | 318 | FunFam | Auxin-responsive protein | 192 | 313 | - | - | |
Pral5618g00031 | 318 | SUPERFAMILY | CAD & PB1 domains | 193 | 298 | - | - | |
Pral5618g00031 | 318 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Pral5618g00031 | 318 | MobiDBLite | consensus disorder prediction | 119 | 182 | - | - | |
Pral5618g00031 | 318 | Pfam | AUX/IAA family | 57 | 306 | IPR033389 | - | |
Pral5618g00031 | 318 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - | |
Pral5618g00031 | 318 | MobiDBLite | consensus disorder prediction | 159 | 174 | - | - | |
Pral5618g00031 | 318 | ProSiteProfiles | PB1 domain profile. | 197 | 301 | IPR000270 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5618g00031 | Pral-Chr5618 | 232450 | 236582 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5618g00031 | 201 | 312 | B3 DNA Binding Superfamily | AT4G23980 | 33.036 | 1.61e-13 | 69.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX or IAA | Pral5618g00031 | AUX_IAA | 6.8e-72 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5618g00031 | K14484 | - | qsa:O6P43_018220 | 351.673 |