Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5618g00020 ATGGAAGGAAGCATGAGGAGGAGCACGAGCAAGACGGGTCGGGTAACAGAAGTGGTGAACAGCGGGCAAGGATCTCGGCGGACTTCAAACTCCGACGAGGACGAGGAGGCTCTGAGGTGGGCGGCGATAGAGAAGTTACCAACCTATGACAGGTTAAGAACAAGCATATTACAGAATTTTGTGGAACAAGGGGAACCTCGTGGATCGAAGGAAGTTGATGTCCGGAAGCTAAATATGAAGGAGAGACAAGAAATCATTGACAGGATTTTCAAGGTCGCCGAGGAAGATAATGAAAAGTTCCTCAGAAAGTTCAGAGCCAGAATTGATCGGGTTGGGATCACACTTCCAACAGTGGAAGTGAGGTTTGAGAATTTGACAGTGGAGGCAAACGCCTACGTTGGCAAAAGAGCTTTACCAACACTCCCAAATGTCTCCTTGAACGTCATCGAATCAGCTTTTGGTTTTCTTGGCATTAACATGGCTCAGAGAAGAAAAATCACCATCCTTAATGACGTCTCTGGCATTATTAAACCTTCCAGGATGACTCTGTTGTTCGGTCCGCCTTCTTCTGGGAAGACAACCCTTTTGTTGGCATTGGCTCAAAAATTAGAACATGGTTTAAAGGTAAAAGGAGAGATCACTTACAATGGGTACAAGCTGAATGAGTTTGTTCCTAGGAAGACATCAGCCTACATAAGTCAAAACGATGAGCATATTGCAGAAATGACTGTCAGAGAAACTCTGGATTTCTCATCAAGATGCCAAGGAGTTGGATCAAGATATGATCTATTAACTGAGCTTGCTAGAAGAGAGAAGGAAGCAGGCATATATCCAGAGGCAGAAGTTGATCTCTTCATGAAAGCTTCTGCTGTCCCAGAAACAGAAAGCAGTCTCATGACTGACTACACTCTCAAAATATTGGGGCTGGACATATGCAAAGACACCATTGTGGGTGATGCGATGCGAAGAGGCATATCAGGAGGACAAAGGAAGAGGCTGACGACAGGGGAGATGATAGTGGGGCCCACAAAGACACTTTTCATGGACGAGATATCGACAGGTCTGGACAGCTCCACCACGTACCAGATAGTGAAATGCTTGCAGCAGATCTGTCACCTTACAGAAGCCACCATCTTTATGTCTCTCCTCCAACCTGCTCCTGAAACCTTCGACCTCTTCGACGATGTTGTCCTCTTGTCGGAAGGCCAGATCGTCTACCAAGGCCCACGTGATCTCATCCTCCAATTCTTCGAATATTGCGGCTTCCGTTGTCCTGAACGAAAGGGAACCGCCGATTTCTTACTAGAGGTTAATTCAAGAAAAGACCAGGAACAATATTGGGCAGACAGAAGCAAGCCATACAGATACATGACAGTTACAGAGTTTGTGAATAGGTTCAAGGAATTTCATGTCGGGGTTCAGCTCAAGAGAGATCTTTCTGTGCCATTCGATAAGTCAAAGGGGCACAGAGCAGCTTTGGTATTTCAGAAGCATTCAGTGGCGAAAATGCAACTTCTTAAAGCATGTTGGGACAAGGAATGGCTACTCATCAGAAGAAACTCCTTCGTCTACATATTCAGATCATGTCAGAACGTCTTTCTCGCAGTTACAACTGCGACGGTGTTCTTCAGGACGACCATGCACCAGAATAACGAGAATGATGGGGCAGTCTATGTTGGGGCCATTGTGTTCTCTATGCTTAACAACATGTTCAATGGTTTCGGAGAGATTGGTCTTATCATGCAAAGGCTTCCCGTGTTTTACAGGCAACGAGACATGCTTTTCCATCCTGTTTGGACTTACACTCTTCCCAATTTTCTGCTTGCATTCCCTCGAATGGTGTCAGAGACCATTCTTTGGGTGGCTATTACCTATTACACTATAGGGTATGCACCTGAAGTTAGCAGGTTCTTTAAGCACCTATTGTTGCTCTTTCTTACTCAAATAATGGCATCTGGATTGTACAAGACACTTGCTGCGGTCTGTAGGTCGGTGATTATTGCTAATACAGGGGGATCCCTCTTGATTCTTCTCATTTTCCTACTAGCTGGTTTCATACTTCCCAAAAATGAGATTCCAAGTTGGTGGGCGTGGACCATGTGGATTTCACCAATGTCATATTCCTACATTGGCCTTGTTTTGAATGAAATGACTGCCCCAAGGTGGATGAACAAAAGTTCTTCGGATGGTTCTACTTCATTAGGTCTAGCTATATTAAAAGCCAGTGGTATATACCCTGAAGCGAAATGGTATTGGATATCTACAGCAGCTATTGTGGGATTAGCAGTTGTGTACCATGTTCTCTTCACCCTTTCACTTGTGTACCTAAACCCTCTTGGACAAAAACAAGCTACTATATCTGAAGAGGAAGCAAGTGAATTGAGTAGCAGAAATAATACTAACTCAGCACTAGAGTCGTCCACTGGAGTTGGCCCCAGCAGAGGAATGGTTCTACCTTTCACACCGCTTGCAATGTCCTTTGATAATGTTAATTACTATGTGGACATGCCAAGGGAAATGAAAGAGCAAGGAGTGACAGATGATAGGCTACAACTACTTAAGGACGTGACTGGAGCGTTTAGACCTGGTGTTCTGACTGCTTTAATGGGAGTCAGTGGAGCAGGAAAGACAACCTTAATGGATGTTTTAGCAGGAAGGAAGACTGGTGGCTACATTGAAGGTGATATCAGAATCTCCGGGTTCCCCAAGAAGCAAGAAACCTTTGCAAGGATTTCTGGTTACTGTGAACAAACTGATGTCCACTCACCTCAAGTTACTGTTTACGAATCTTTGATTTTCTCTGCTTTCCTCCGAATACCTAAAGAAGTCAGTCAGAAAGAAAAGAAGAAATTTGTGGAAGAAGTAATGGATTTGGTGGAGCTGAACAATCTCAAGGATGCTATAGTAGGCATTCCAGGTGTAACAGGATTGTCAACAGAGCAAAGAAAGAGACTGACAATTGCAGTTGAGCTTGTTGCCAATCCTTCAATCATTTTTATGGATGAGCCCACTTCAGGTCTAGATGCAAGAGCAGCCGCCATTGTAATGAGAACTGTGAGAAATACAGTTGACACTGGAAGAACAGTTGTTTGCACAATTCACCAACCTAGTATTGATATCTTTGAAGCCTTTGATGAGCTCTTGCTGATGAAGAGAGGAGGGCAAGTAATCTACTCAGGTCCACTAGGTCGTCATTCTCAAAAAATCATAGAATTCTTTGAGGCAATCGAAGGTGTCCCAAAAATCAGGGACAAATACAATCCAGCCGCGTGGATGCTAGAAGTAACTTCCATTGCAGCAGAAGTTCGACTTGGAATTGATTTTGCTGAACAGTACAAGTCATCATCTTTGTACCAGCGAAACAAAGAACTTGTGAAGGAGTTAAGCATACCACCAGGTGGGGCAAACGATCTCTACTTTGAGAGTCAGTATGCAGAATCAACATGGGGACAATTCAAATACTGTTTGTGGAAGAAATGGTGGAGTTACTGGAGGAATCCAGCTTATAACCTTGTCAGATTCTTCTTCACTTTGGTAACTGGCCTCCTTATGGGGACAATATTTTGGGGGTTTGGAAAAAGAAGGAAAAGCTGGAATGACCTCAGAGTCGTTATAGGAGCCATGTTTTCTGCTGTCCAATTTGTTGGAGTCAACAACTGCTCAACTATACAACCAGTAGTAGGCGTTGAGAGAACAGTATTTTATCGAGAAAAGGCTGCTGGAATGTACGCAGGCTTGCCTTATGCCATAGCCCAGGTTGTGATTGAAATTCCTTATATATTTATTCAATGTACATATTACTCGATCATAGTATACTCTATGATTGCATTTGAATGGACTGCAGCAAAGTTCTTCTGGTTCTACTTCATCTGCTTCTTCTCCTTCCTGTACTTCACATATTATGGTATGATGTCTGTGGCAGTCACTCCCACCACCCAACTTGCAGCAATTTTCTCATCAGCATTCTATGGACTCTTCAATATCTTTTCTGGTTTTATGATCCCAAGACCAAGGATTCCTAAGTGGTGGTCTTGGTATTGCTGGATTTGCCCAGTGGCATGGACAATTTATGGATTGATTGTGTCACAGTATGGAGATGTAGAAGACAGGATTGAAGTTCCTGGGATGGATAATGGTCAACCGATCAAGGAGTTCATTCAAAGCTATTTTGGGTATGATCCAAACTTCATGGGACCTATTGCTGCAGTTTTGGTCGGCTTCACTGTCTTCTTTGCTTTCATGTTTGCTTTTTGCATTCAATTCCTAAATTTCCAGACCAGATAG 4284 0.4351 MEGSMRRSTSKTGRVTEVVNSGQGSRRTSNSDEDEEALRWAAIEKLPTYDRLRTSILQNFVEQGEPRGSKEVDVRKLNMKERQEIIDRIFKVAEEDNEKFLRKFRARIDRVGITLPTVEVRFENLTVEANAYVGKRALPTLPNVSLNVIESAFGFLGINMAQRRKITILNDVSGIIKPSRMTLLFGPPSSGKTTLLLALAQKLEHGLKVKGEITYNGYKLNEFVPRKTSAYISQNDEHIAEMTVRETLDFSSRCQGVGSRYDLLTELARREKEAGIYPEAEVDLFMKASAVPETESSLMTDYTLKILGLDICKDTIVGDAMRRGISGGQRKRLTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQICHLTEATIFMSLLQPAPETFDLFDDVVLLSEGQIVYQGPRDLILQFFEYCGFRCPERKGTADFLLEVNSRKDQEQYWADRSKPYRYMTVTEFVNRFKEFHVGVQLKRDLSVPFDKSKGHRAALVFQKHSVAKMQLLKACWDKEWLLIRRNSFVYIFRSCQNVFLAVTTATVFFRTTMHQNNENDGAVYVGAIVFSMLNNMFNGFGEIGLIMQRLPVFYRQRDMLFHPVWTYTLPNFLLAFPRMVSETILWVAITYYTIGYAPEVSRFFKHLLLLFLTQIMASGLYKTLAAVCRSVIIANTGGSLLILLIFLLAGFILPKNEIPSWWAWTMWISPMSYSYIGLVLNEMTAPRWMNKSSSDGSTSLGLAILKASGIYPEAKWYWISTAAIVGLAVVYHVLFTLSLVYLNPLGQKQATISEEEASELSSRNNTNSALESSTGVGPSRGMVLPFTPLAMSFDNVNYYVDMPREMKEQGVTDDRLQLLKDVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQTDVHSPQVTVYESLIFSAFLRIPKEVSQKEKKKFVEEVMDLVELNNLKDAIVGIPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRHSQKIIEFFEAIEGVPKIRDKYNPAAWMLEVTSIAAEVRLGIDFAEQYKSSSLYQRNKELVKELSIPPGGANDLYFESQYAESTWGQFKYCLWKKWWSYWRNPAYNLVRFFFTLVTGLLMGTIFWGFGKRRKSWNDLRVVIGAMFSAVQFVGVNNCSTIQPVVGVERTVFYREKAAGMYAGLPYAIAQVVIEIPYIFIQCTYYSIIVYSMIAFEWTAAKFFWFYFICFFSFLYFTYYGMMSVAVTPTTQLAAIFSSAFYGLFNIFSGFMIPRPRIPKWWSWYCWICPVAWTIYGLIVSQYGDVEDRIEVPGMDNGQPIKEFIQSYFGYDPNFMGPIAAVLVGFTVFFAFMFAFCIQFLNFQTR 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5618g00020 1427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 426 IPR027417 -
Pral5618g00020 1427 Pfam ABC-2 type transporter 384 461 IPR043926 GO:0140359
Pral5618g00020 1427 Pfam ABC-2 type transporter 1034 1095 IPR043926 GO:0140359
Pral5618g00020 1427 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 8 1427 - -
Pral5618g00020 1427 MobiDBLite consensus disorder prediction 1 27 - -
Pral5618g00020 1427 Pfam Plant PDR ABC transporter associated 722 786 IPR013581 -
Pral5618g00020 1427 Pfam ABC transporter 853 1005 IPR003439 GO:0005524
Pral5618g00020 1427 MobiDBLite consensus disorder prediction 790 809 - -
Pral5618g00020 1427 Pfam ABC-2 type transporter 505 716 IPR013525 GO:0016020|GO:0140359
Pral5618g00020 1427 Pfam ABC-2 type transporter 1151 1364 IPR013525 GO:0016020|GO:0140359
Pral5618g00020 1427 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Pral5618g00020 1427 CDD ABCG_PDR_domain2 822 1060 IPR034003 -
Pral5618g00020 1427 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 825 1078 IPR003439 GO:0005524
Pral5618g00020 1427 Pfam ABC-transporter N-terminal 81 144 IPR029481 -
Pral5618g00020 1427 FunFam ABC transporter G family member 34 156 460 - -
Pral5618g00020 1427 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 153 426 IPR003439 GO:0005524
Pral5618g00020 1427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 206 IPR027417 -
Pral5618g00020 1427 FunFam ABC transporter G family member 40 839 1069 - -
Pral5618g00020 1427 CDD ABCG_PDR_domain1 163 408 IPR034001 -
Pral5618g00020 1427 SMART AAA_5 178 403 IPR003593 GO:0016887
Pral5618g00020 1427 SMART AAA_5 862 1054 IPR003593 GO:0016887
Pral5618g00020 1427 Gene3D - 839 1073 IPR027417 -
Pral5618g00020 1427 Gene3D - 156 419 IPR027417 -
Pral5618g00020 1427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 847 1062 IPR027417 -
Pral5618g00020 1427 MobiDBLite consensus disorder prediction 790 810 - -
Pral5618g00020 1427 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5618g00020 Pral-Chr5618 127156 135242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5618g00020 850 1037 Calmodulin-binding Proteins AT2G36910 26.794 6.83e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5618g00020 K08711 - pop:7475100 2102.41