Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5618g00019 ATGGAAGGAAGCATGAGGAGGAGCACGAGCAAGACGGGTCGGGTAACAGAAGTGGTGAACAGCGGGCAAGGATCTCGGCGGACTTCAAACTCCGACGAGGACGAGGAGGCTCTGAGGTGGGCGGCGATAGAGAAGTTACCAACCTATGACAGGTTAAGAACAAGCATATTACAGAATTTTGTGGAACAAGGGGAACCTCGTGGATCGAAGGAAGTTGATGTCCGGAAGCTAAATATGAAGGAGAGACAAGAAATCATTGACAGGATTTTCAAGGTCGCCGAGGAAGATAATGAAAAGTTCCTCAGAAAGTTCAGAGCCAGAATTGATCGGGTTGGGATCACACTTCCAACAGTGGAAGTGAGGTTTGAGAATTTGACAGTGGAGGCAAACGCCTACGTTGGCAAAAGAGCTTTACCAACACTCCCAAATGTCTCCTTGAACGTCATCGAATCAGCTTTTGGTTTTCTTGGCATTAACATGGCTCAGAGAAGAAAAATCACCATCCTTAATGACGTCTCTGGCATTATTAAACCTTCCAGGATGACTCTGTTGTTCGGTCCGCCTTCTTCTGGGAAGACAACCCTTTTGTTGGCATTGGCTCAAAAATTAGAACATGGTTTAAAGGTAAAAGGAGAGATCACTTACAATGGGTACAAGCTGAATGAGTTTGTTCCTAGGAAGACATCAGCCTACATAAGTCAAAACGATGAGCATATTGCAGAAATGACTGTCAGAGAAACTCTGGATTTCTCATCAAGATGCCAAGGAGTTGGATCAAGATATGATCTATTAACTGAGCTTGCTAGAAGAGAGAAGGAAGCAGGCATATATCCAGAGGCAGAAGTTGATCTCTTCATGAAAGCTTCTGCTGTCCCAGAAACAGAAAGCAGTCTCATGACTGACTACACTCTCAAAATATTGGGGCTGGACATATGCAAAGACACCATTGTGGGTGATGCGATGCGAAGAGGCATATCAGGAGGACAAAGGAAGAGGCTGACGACAGGGGAGATGATAGTGGGGCCCACAAAGACACTTTTCATGGACGAGATATCGACAGGTCTGGACAGCTCCACCACGTACCAGATAGTGAAATGCTTGCAGCAGATCTGTCACCTTACAGAAGCCACCATCTTTATGTCTCTCCTCCAACCTGCTCCTGAAACCTTCGACCTCTTCGACGATGTTGTCCTCTTGTCGGAAGGCCAGATCGTCTACCAAGGCCCACGTGATCTCATCCTCCAATTCTTCGAATATTGCGGCTTCCGTTGTCCTGAACGAAAGGGAACCGCCGATTTCTTACTAGAGGTTAATTCAAGAAAAGACCAGGAACAATATTGGGCAGACAGAAGCAAGCCATACAGATACATGACAGTTACAGAGTTTGTGAATAGGTTCAAGGAATTTCATGTCGGGGTTCAGCTCAAGAGAGATCTTTCTGTGCCATTCGATAAGTCAAAGGGGCACAGAGCAGCTTTGGTATTTCAGAAGCATTCAGTGGCGAAAATGCAACTTCTTAAAGCATGTTGGGACAAGGAATGGCTACTCATCAGAAGAAACTCCTTCGTCTACATATTCAGATCATGTCAGAACGTCTTTCTCGCAGTTACAACTGCGACGGTGTTCTTCAGGACGACCATGCACCAGAATAACGAGAATGATGGGGCAGTCTATGTTGGGGCCATTGTGTTCTCTATGCTTAACAACATGTTCAATGGTTTCGGAGAGATTGGTCTTATCATGCAAAGGCTTCCCGTGTTTTACAGGCAACGAGACATGCTTTTCCATCCTGTTTGGACTTACACTCTTCCCAATTTTCTGCTTGCATTCCCTCGAATGGTGTCAGAGACCATTCTTTGGGTGGCTATTACCTATTACACTATAGGGTATGCACCTGAAGTTAGCAGGTTCTTTAAGCACCTATTGTTGCTCTTTCTTACTCAAATAATGGCATCTGGATTGTACAAGACACTTGCTGCGGTCTGTAGGTCGGTGATTATTGCTAATACAGGGGGATCCCTCTTGATTCTTCTCATTTTCCTACTAGCTGGTTTCATACTTCCCAAAAATGAGATTCCAAGTTGGTGGGCGTGGACCATGTGGATTTCACCAATGTCATATTCCTACATTGGCCTTGTTTTGAATGAAATGACTGCCCCAAGGTGGATGAACAAAAGTTCTTCGGATGGTTCTACTTCATTAGGTCTAGCTATATTAAAAGCCAGTGGTATATACCCTGAAGCGAAATGGTATTGGATATCTACAGCAGCTATTGTGGGATTAGCAGTTGTGTACCATGTTCTCTTCACCCTTTCACTTGTGTACCTAAACCCTCTTGGACAAAAACAAGCTACTATATCTGAAGAGGAAGCAAGTGAAGTGGAGACTAGAATAAACAAAAGACAAGTGCAAATGCAGCAGTTGAGTAGCAGAAATAATACTAACTCAGCACTAGAGTCGTCCACTGGAGTTGGCCCCAGCAGAGGAATGGTTCTACCTTTCACACCGCTTGCAATGTCCTTTGATAATGTTAATTACTATGTGGACATGCCAAGGGAAATGAAAGAGCAAGGAGTGACAGATGATAGGCTACAACTACTTAAGGACGTGACTGGAGCGTTTAGACCTGGTGTTCTGACTGCTTTAATGGGAGTCAGTGGAGCAGGAAAGACAACCTTAATGGATGTTTTAGCAGGAAGGAAGACTGGTGGCTACATTGAAGGTGATATCAGAATCTCCGGGTTCCCCAAGAAGCAAGAAACCTTTGCAAGGATTTCTGGTTACTGTGAACAAACTGATGTCCACTCACCTCAAGTTACTGTTTACGAATCTTTGATTTTCTCTGCTTTCCTCCGAATACCTAAAGAAGTCAGTCAGAAAGAAAAGAAGAAATTTGTGGAAGAAGTAATGGATTTGGTGGAGCTGAACAATCTCAAGGATGCTATAGTAGGCATTCCAGGTGTAACAGGATTGTCAACAGAGCAAAGAAAGAGACTGACAATTGCAGTTGAGCTTGTTGCCAATCCTTCAATCATTTTTATGGATGAGCCCACTTCAGGTCTAGATGCAAGAGCAGCCGCCATTGTAATGAGAACTGTGAGAAATACAGTTGACACTGGAAGAACAGTTGTTTGCACAATTCACCAACCTAGTATTGATATCTTTGAAGCCTTTGATGAGCTCTTGCTGATGAAGAGAGGAGGGCAAGTAATCTACTCAGGTCCACTAGGTCGTCATTCTCAAAAAATCATAGAATTCTTTGAGGCAATCGAAGGTGTCCCAAAAATCAGGGACAAATACAATCCAGCCGCGTGGATGCTAGAAGTAACTTCCATTGCAGCAGAAGTTCGACTTGGAATTGATTTTGCTGAACAGTACAAGTCATCATCTTTGTACCAGCGAAACAAAGAACTTGTGAAGGAGTTAAGCATACCACCAGGTGGGGCAAACGATCTCTACTTTGAGAGTCAGTATGCAGAATCAACATGGGGACAATTCAAATACTGTTTGTGGAAGAAATGGTGGAGTTACTGGAGGAATCCAGCTTATAACCTTGTCAGATTCTTCTTCACTTTGGTAACTGGCCTCCTTATGGGGACAATATTTTGGGGGTTTGGAAAAAGAAGGAAAAGCTGGAATGACCTCAGAGTCGTTATAGGAGCCATGTTTTCTGCTGTCCAATTTGTTGGAGTCAACAACTGCTCAACTATACAACCAGTAGTAGGCGTTGAGAGAACAGTATTTTATCGAGAAAAGGCTGCTGGAATGTACGCAGGCTTGCCTTATGCCATAGCCCAGGTTGTGATTGAAATTCCTTATATATTTATTCAATGTACATATTACTCGATCATAGTATACTCTATGATTGCATTTGAATGGACTGCAGCAAAGTTCTTCTGGTTCTACTTCATCTGCTTCTTCTCCTTCCTGTACTTCACATATTATGGTATGATGTCTGTGGCAGTCACTCCCACCACCCAACTTGCAGCAATTTTCTCATCAGCATTCTATGGACTCTTCAATATCTTTTCTGGTTTTATGATCCCAAGACCAAGGATTCCTAAGTGGTGGTCTTGGTATTGCTGGATTTGCCCAGTGGCATGGACAATTTATGGATTGATTGTGTCACAGTATGGAGATGTAGAAGACAGGATTGAAGTTCCTGGGATGGATAATGGTCAACCGATCAAGGAGTTCATTCAAAGCTATTTTGGGTATGATCCAAACTTCATGGGACCTATTGCTGCAGTTTTGGTCGGCTTCACTGTCTTCTTTGCTTTCATGTTTGCTTTTTGCATTCAATTCCTAAATTTCCAGACCAGATAG 4326 0.4348 MEGSMRRSTSKTGRVTEVVNSGQGSRRTSNSDEDEEALRWAAIEKLPTYDRLRTSILQNFVEQGEPRGSKEVDVRKLNMKERQEIIDRIFKVAEEDNEKFLRKFRARIDRVGITLPTVEVRFENLTVEANAYVGKRALPTLPNVSLNVIESAFGFLGINMAQRRKITILNDVSGIIKPSRMTLLFGPPSSGKTTLLLALAQKLEHGLKVKGEITYNGYKLNEFVPRKTSAYISQNDEHIAEMTVRETLDFSSRCQGVGSRYDLLTELARREKEAGIYPEAEVDLFMKASAVPETESSLMTDYTLKILGLDICKDTIVGDAMRRGISGGQRKRLTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQICHLTEATIFMSLLQPAPETFDLFDDVVLLSEGQIVYQGPRDLILQFFEYCGFRCPERKGTADFLLEVNSRKDQEQYWADRSKPYRYMTVTEFVNRFKEFHVGVQLKRDLSVPFDKSKGHRAALVFQKHSVAKMQLLKACWDKEWLLIRRNSFVYIFRSCQNVFLAVTTATVFFRTTMHQNNENDGAVYVGAIVFSMLNNMFNGFGEIGLIMQRLPVFYRQRDMLFHPVWTYTLPNFLLAFPRMVSETILWVAITYYTIGYAPEVSRFFKHLLLLFLTQIMASGLYKTLAAVCRSVIIANTGGSLLILLIFLLAGFILPKNEIPSWWAWTMWISPMSYSYIGLVLNEMTAPRWMNKSSSDGSTSLGLAILKASGIYPEAKWYWISTAAIVGLAVVYHVLFTLSLVYLNPLGQKQATISEEEASEVETRINKRQVQMQQLSSRNNTNSALESSTGVGPSRGMVLPFTPLAMSFDNVNYYVDMPREMKEQGVTDDRLQLLKDVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQTDVHSPQVTVYESLIFSAFLRIPKEVSQKEKKKFVEEVMDLVELNNLKDAIVGIPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRHSQKIIEFFEAIEGVPKIRDKYNPAAWMLEVTSIAAEVRLGIDFAEQYKSSSLYQRNKELVKELSIPPGGANDLYFESQYAESTWGQFKYCLWKKWWSYWRNPAYNLVRFFFTLVTGLLMGTIFWGFGKRRKSWNDLRVVIGAMFSAVQFVGVNNCSTIQPVVGVERTVFYREKAAGMYAGLPYAIAQVVIEIPYIFIQCTYYSIIVYSMIAFEWTAAKFFWFYFICFFSFLYFTYYGMMSVAVTPTTQLAAIFSSAFYGLFNIFSGFMIPRPRIPKWWSWYCWICPVAWTIYGLIVSQYGDVEDRIEVPGMDNGQPIKEFIQSYFGYDPNFMGPIAAVLVGFTVFFAFMFAFCIQFLNFQTR 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5618g00019 1441 Gene3D - 853 1087 IPR027417 -
Pral5618g00019 1441 Gene3D - 156 419 IPR027417 -
Pral5618g00019 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 861 1076 IPR027417 -
Pral5618g00019 1441 Pfam ABC-2 type transporter 1165 1378 IPR013525 GO:0016020|GO:0140359
Pral5618g00019 1441 Pfam ABC-2 type transporter 505 716 IPR013525 GO:0016020|GO:0140359
Pral5618g00019 1441 Pfam ABC transporter 867 1019 IPR003439 GO:0005524
Pral5618g00019 1441 CDD ABCG_PDR_domain2 836 1074 IPR034003 -
Pral5618g00019 1441 Pfam Plant PDR ABC transporter associated 722 786 IPR013581 -
Pral5618g00019 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 839 1092 IPR003439 GO:0005524
Pral5618g00019 1441 SMART AAA_5 178 403 IPR003593 GO:0016887
Pral5618g00019 1441 SMART AAA_5 876 1068 IPR003593 GO:0016887
Pral5618g00019 1441 MobiDBLite consensus disorder prediction 1 27 - -
Pral5618g00019 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 426 IPR027417 -
Pral5618g00019 1441 Pfam ABC-transporter N-terminal 82 144 IPR029481 -
Pral5618g00019 1441 Pfam ABC-2 type transporter 384 461 IPR043926 GO:0140359
Pral5618g00019 1441 Pfam ABC-2 type transporter 1048 1109 IPR043926 GO:0140359
Pral5618g00019 1441 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Pral5618g00019 1441 FunFam ABC transporter G family member 40 853 1083 - -
Pral5618g00019 1441 FunFam ABC transporter G family member 34 156 460 - -
Pral5618g00019 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 153 426 IPR003439 GO:0005524
Pral5618g00019 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 206 IPR027417 -
Pral5618g00019 1441 CDD ABCG_PDR_domain1 163 408 IPR034001 -
Pral5618g00019 1441 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 8 1441 - -
Pral5618g00019 1441 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5618g00019 Pral-Chr5618 127156 135242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5618g00019 864 1051 Calmodulin-binding Proteins AT2G36910 26.794 7.91e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5618g00019 K08711 - qsu:112016946 2135.15