Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5618g00016 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGGGCAGCAGCAAAGAAACAGCAACAGCAGCAACCTAATCCGTTGATCGAGGAGGGGGAGGCAATTGCAACAAGAACAAGGGGACGGCGGGCGGCGGCGGCGGCGGCAGCTGAGCCTAAGGCTAACAAACAACATAAGCAGGTGGTGGTCGATGAGAAGGTAGCTGTCCCGGTGAAGGAGGACGAGATCAAGGGTTTGAACGAAGCTGTTCGTGCTGGTGAAGCTGCTGCTGGTGGAGCGGAGAGAGAAGAGGTTGGGGAGAAGCAGATGGATGACTACGATAGTGGAGCCCGGAGCAATGATAAGGGCAATGCCGGTGAAGATGAGGGGAGCACCGCTCCCCTTCCTGAGAAGGTTCAGGTTGGTGGCTCCCCTATGTATAAAATTGAGCGAAAACTGGGTAAGGGTGGATTTGGACAAGTGTATGTTGGTCGACGAATTTCTGGTGTAAATATGAATGAGAGGACCGGACCTGGAGCTGTAGAGGTTGCCCTAAAATTTGAGCATAGAAGTAGTAAAGGATGTAACTATGGACCGCCATATGAGTGGCAAGTGTACAATACTCTTGGTGGAAGTCATGGTGTGCCACGAGTACACCACAAGGGAAGGCAAGGTGACTATTATGTCATGGTTATGGATATGTTGGGACCTAGCTTATGGGATGTTTGGAATAATAACTCTCACACAATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAGATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCACCTGGGACCCCTGACGAAAAAAAGCTGTTTCTTGTTGATCTTGGGTTAGCTACTAGATGGAGGGATAGCACAACGGGTATGCATGTGGAATATGACCAACGCCCAGATGTTTTCAGGGGTACTGTTCGATATGCAAGCGTGCATGCACACTTGGGAAGAACTGGCAGCAGAAGGGATGATCTAGAATCACTTGCTTACACACTGATTTTCCTTCTTCGAGGTCGTCTCCCTTGGCAGGGGTATCAGGGAGAAAACAAAGGGTTCCTTGTTTGCAAAAAGAAGATGGGAACTTCTCCGGAGAGCCTATGTTGCTTCTGCCCCCAGCCTTTTAGACAGTTTGTTGAACATGTGGTGAACTTGAAGTTCGATGAAGATCCTAACTATGCAAAATATATTTCTCTGTTTGATGGCATTGTTGGTCCAAATCCGGATATTAGGCCAATTAATACGGAAGGTGCACAAAAGCTAATTGGTCATAAGAGAGGTCGGTTGGCCATGGAAGAAGAGGATGATGAACAACCTAAAAAGAAGATCCGCATGGGTATGCCAGCAACACAATGGATAAGTGTTTACAATGCTCGCAGACCAATGAAACAAAGATATCATTACAATGTGGCAGATGCAAGGCTGTCCCAGCACATTGAGAAAGGAAATGAGGATGGGTTATATATTAGCAGCGTGGCTTCATGTCAGAACCTGTGGGCCCTAATCATGGATGCGGGAACTGGCTTTTCTGCCCAAGTCTATGAACTCTCGCCCTTTTTTCTCCACAAGGAATGGATAATGGATCAGTGGGAAAAAAATTACTATATAAGTGCCATAGCTGGAGCTACAAATGGGAGTTCGTTAGTTGTGATGTCTAAGGGCACACAGTTTGTACAGCAGTCCTACAAAGTGAGTGATTCATTTCCATTCAAGTGGATAAACAAAAAATGGAGGGAGGGCTTTTATGTCACGGCAATGGCCACTGCTGGCAGCAGATGGGCAGTAGTCATGTCTCGTGGTGCAGGCTTTTCTGATCAGGTGGTTGAATTAGATTTTCTTTATCCCAGTGAAGGGATTCACAAACGCTGGGATTATGGATACCGTATCACAGCAACCGCAGCAACTTGGGATCAAGCAGCATTTGTCCTGAGTGTGCCTAGGAGGAAACCTGCGGATGAAACACAGGAAACACTTAGAACTTCGTCTTTTCCTAGTGTACATGTCAAGGAGAAGTGGGCAAAGAACCTCTATATTGCATCTATTTGCTATGGAAGAACAGTGTCTTGA 2109 0.4704 MPVLRSGVRRGRAAAKKQQQQQPNPLIEEGEAIATRTRGRRAAAAAAAEPKANKQHKQVVVDEKVAVPVKEDEIKGLNEAVRAGEAAAGGAEREEVGEKQMDDYDSGARSNDKGNAGEDEGSTAPLPEKVQVGGSPMYKIERKLGKGGFGQVYVGRRISGVNMNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHHKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPESLCCFCPQPFRQFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRMGMPATQWISVYNARRPMKQRYHYNVADARLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFSAQVYELSPFFLHKEWIMDQWEKNYYISAIAGATNGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAVVMSRGAGFSDQVVELDFLYPSEGIHKRWDYGYRITATAATWDQAAFVLSVPRRKPADETQETLRTSSFPSVHVKEKWAKNLYIASICYGRTVS 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5618g00016 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pral5618g00016 702 CDD STKc_CK1 137 414 - -
Pral5618g00016 702 MobiDBLite consensus disorder prediction 88 116 - -
Pral5618g00016 702 MobiDBLite consensus disorder prediction 1 59 - -
Pral5618g00016 702 MobiDBLite consensus disorder prediction 85 131 - -
Pral5618g00016 702 FunFam casein kinase 1-like protein HD16 111 458 - -
Pral5618g00016 702 ProSiteProfiles Protein kinase domain profile. 138 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5618g00016 702 PANTHER CASEIN KINASE-RELATED 132 665 - -
Pral5618g00016 702 Pfam Protein kinase domain 138 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5618g00016 702 ProSitePatterns Protein kinases ATP-binding region signature. 144 177 IPR017441 GO:0005524
Pral5618g00016 702 SMART serkin_6 138 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5618g00016 702 Gene3D Transferase(Phosphotransferase) domain 1 104 461 - -
Pral5618g00016 702 SUPERFAMILY Protein kinase-like (PK-like) 138 418 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5618g00016 Pral-Chr5618 102730 108323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5618g00016 143 414 MAP Kinase Kinase Kinase AT5G50180 25.430 2.45e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pral5618g00016 Pkinase 4.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5618g00016 - - qsa:O6P43_018208 1231.47