Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5618g00001 ATGGCTTCTCTTGTTGTGCTCATTTTCATGGCTGCCACCTTCATCACTGCTTCTCCATCACTCACCGAAGCTTCGAGGCAATTCAAGGTTGGTGATGACTTGGGTTGGCACCAACCTGACCCTCATAACTCTGCCTTTTATATCCACTGGGCTGAAACAAACCGATTCCAAATCGGTGACTCTCTTGGTCAGTTCTTCTCTCTCTTCTTCACTTCTCACCTCTCTGCAGAATTTGAGTACCAGAACGACTCAGTACTAACAGTGGAAAAATGGGATTATTATCACTGTGATGCGAGCGACCCCATCACTGCGTTTGACAATGGCAAGAGTATAATCAATCTGGACAGAGCTGGGCCTTTCTACTTCATCAGTGGCGTTCATGACCACTGCATCAACGGCCAGAAGTTGATCGTCGATGTCATGTCCCCACACCCCCTCCCTCCTGCATCTCCACCGTCCATTTCTCCCGCTGCTCCTCCACAGCCTCCAGTGGGCCCCTCGCCTTCTTCTTCTTCACCTTCATCTTCTCCTTCATCTTCCCCTAGTAGTTCTGCTTCTGAGCCTGAGGTTTCATCTTCATCAGTGGTTCTGGGATCAGATTTCATGGCTATTCTGCTCGGCCTTCTTGTGATCATCCTGCAATATTAA 648 0.4892 MASLVVLIFMAATFITASPSLTEASRQFKVGDDLGWHQPDPHNSAFYIHWAETNRFQIGDSLGQFFSLFFTSHLSAEFEYQNDSVLTVEKWDYYHCDASDPITAFDNGKSIINLDRAGPFYFISGVHDHCINGQKLIVDVMSPHPLPPASPPSISPAAPPQPPVGPSPSSSSPSSSPSSSPSSSASEPEVSSSSVVLGSDFMAILLGLLVIILQY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5618g00001 215 PANTHER BLUE COPPER PROTEIN 22 173 IPR039391 GO:0009055
Pral5618g00001 215 MobiDBLite consensus disorder prediction 148 190 - -
Pral5618g00001 215 SUPERFAMILY Cupredoxins 25 141 IPR008972 -
Pral5618g00001 215 MobiDBLite consensus disorder prediction 148 170 - -
Pral5618g00001 215 FunFam Cupredoxin superfamily protein 25 145 - -
Pral5618g00001 215 Pfam Plastocyanin-like domain 43 134 IPR003245 GO:0009055
Pral5618g00001 215 Gene3D - 25 147 IPR008972 -
Pral5618g00001 215 MobiDBLite consensus disorder prediction 171 190 - -
Pral5618g00001 215 ProSiteProfiles Phytocyanin domain profile. 26 142 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5618g00001 Pral-Chr5618 14561 15653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5618g00001 5 156 Phytocyanin Superfamily AT1G79800 47.742 6.99e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5618g00001 - - gmx:102664880 163.31