Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00032 ATGATGTTCAAGTCCTTAATTTCTGCAATTGTTTCACTAAGCTTCTTGCCAATATTCTCTGGCACGACTGTAGCTGATCTGAACTCTGATGGACAAGCTCTCTTGGACTTTGCTTCCAGTGTCCCACATGCCCGAAGACTCAACTGGAATGATTCTGCTTCAATTTGCAGCTCATGGGTGGGTGTAACTTGTAACCCAGACAAAACTCGGGTCATTGCTATTCATCTTCCAGGAATTGGCCTCAAAGGCCACATTCCAGAAAACAGCATAGGAAAACTAGATGCCCTTACAGTACTGAGTCTTCACACCAATGGCCTTAATGGGAAGCTTCCTTCAGACATCCTTTCCATTCGTTCACTCGAGTATGTACACCTTCAGCAGAATAATTTCTCAGGTCCAATCCCTTCATCTGTCTCTCCTAAACTCATTGCACTTGATATTTCTTTCAACTCCTTCTCTGGCACTATCCCACCTACATTTGTCAATCTCAGAAGACTCACCTGGTTGTATTTTCAAAACAATTCCATCTCTGGACATATCCCAGACTTCAACCTCCCAATGCTCAAATATCTTAATTTGAGTAATAATAACTTGAGTGGCTCAATTCCAAACTCTATCCAAAAATTTCCTCACACTTCTTTTCTTGGGAACTCTCTTTTGTGCGGGCCACCTCTGAATCATTGCTCTGCAGTCAACCCTTCTCGATCTCCTCCGTCTGCTTACCCCCCAGTCACTCCATCAAGTACCCACAGTCAAAAAGCTACCAACCCAAAGAAAAGATTTGGATTGGCTTCTATACTTGCTCTGGTAATTGGGGGCTGTGCGTTCCTAGCTCTCCTAGTTTTGGTAATCTCTTTGTGCTGTTGCAAGAAGAAAAACGGTCAAAGCAGTGGCATACTGAAAGCGAAGGCAGCTTGTGCAGGAAAGAACGAGATTTCAAAGAGTTTTGGAAGTGGAGTACAAGAGGCTGAGAAGAACAAGTTGTTCTTCTTCAGAGGGTGCTCTTATACCTTTGACCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCTTGGAAAGGGAAGCTATGGAACAGCCTACAAGGCTGTTTTGGAGGAGGGAACAACAGTGGTGGTTAAGAGGTTGAGGGAAGTTGTGGTCGGGAAGAAGGAGTTTGAACAGCAGATGGATATTGTGGGGAGAGTAGGAAGCCACCCTAATGTCATGCCTCTTCAAGCTTATTACTATTCCAAAGATGAGAAACTCCTAGTTTGCAGCTTCATGCCAGGCGGAAGCTTGTTTGCCTCATTGCATGGAAACAGGGGAGAGGGAAGAACTCCACTGGACTGGGATGCAAGAATGAAGGTCTCACTTGGAGTTGCCAAAGGAATCGCTTTCATACACTCCGAAGGGGGTCCAAAATTCACACACGGCAACATCAAGTCCACCAATGTCCTCCTAACCCAGGACCTCGACGGCTGCATCTCCGACGTCGGATTGCCTCCGCTGATGAGCACTCCGGCAACCATGTCCAGATCTAACGGCTACCGAGCGCCAGAGGTGACGGACGCCCGAAAAATCACCCACAAATCTGATGTCTACAGCTTCGGGGTGCTCCTCCTGGAAATGCTGACGGGGAAATGCCCGATGAGATACCCTGGTCATGACGAGGTGGTGGATCTGCCGAGGTGGGTTAGGTCCGTCGTCCGAGAGGAGTGGACGGCGGAAGTGTTCGACGAGGAGCTATTGAGAGGGCGATATGTGGAAGAGGAAATGGTGCAGATGCTTCAGATTGCGCTGGCGTGCGTAGGGAAGGCGCCAGATATGAGGCCCAGGATGGAGGAAGCTGTGAGAATGATGGAGGAAATCAGGCAGCCGGAGTTGAAGAACCGGCCTTCTTCCGAGTCCGACTCCAATCTGCAAACACCTTGA 1911 0.4804 MMFKSLISAIVSLSFLPIFSGTTVADLNSDGQALLDFASSVPHARRLNWNDSASICSSWVGVTCNPDKTRVIAIHLPGIGLKGHIPENSIGKLDALTVLSLHTNGLNGKLPSDILSIRSLEYVHLQQNNFSGPIPSSVSPKLIALDISFNSFSGTIPPTFVNLRRLTWLYFQNNSISGHIPDFNLPMLKYLNLSNNNLSGSIPNSIQKFPHTSFLGNSLLCGPPLNHCSAVNPSRSPPSAYPPVTPSSTHSQKATNPKKRFGLASILALVIGGCAFLALLVLVISLCCCKKKNGQSSGILKAKAACAGKNEISKSFGSGVQEAEKNKLFFFRGCSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVVVGKKEFEQQMDIVGRVGSHPNVMPLQAYYYSKDEKLLVCSFMPGGSLFASLHGNRGEGRTPLDWDARMKVSLGVAKGIAFIHSEGGPKFTHGNIKSTNVLLTQDLDGCISDVGLPPLMSTPATMSRSNGYRAPEVTDARKITHKSDVYSFGVLLLEMLTGKCPMRYPGHDEVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVGKAPDMRPRMEEAVRMMEEIRQPELKNRPSSESDSNLQTP 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00032 636 FunFam Leucine-rich repeat receptor-like protein kinase 140 228 - -
Pral5615g00032 636 SUPERFAMILY L domain-like 40 226 - -
Pral5615g00032 636 MobiDBLite consensus disorder prediction 615 636 - -
Pral5615g00032 636 FunFam Leucine-rich repeat receptor-like protein kinase 29 139 - -
Pral5615g00032 636 Pfam Protein kinase domain 349 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5615g00032 636 FunFam pollen receptor-like kinase 1 313 420 - -
Pral5615g00032 636 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Pral5615g00032 636 PANTHER OS05G0588300 PROTEIN 10 628 - -
Pral5615g00032 636 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 421 627 - -
Pral5615g00032 636 SUPERFAMILY Protein kinase-like (PK-like) 349 614 IPR011009 -
Pral5615g00032 636 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5615g00032 636 Gene3D Phosphorylase Kinase; domain 1 311 420 - -
Pral5615g00032 636 MobiDBLite consensus disorder prediction 232 255 - -
Pral5615g00032 636 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Pral5615g00032 636 ProSitePatterns Protein kinases ATP-binding region signature. 351 382 IPR017441 GO:0005524
Pral5615g00032 636 Gene3D Transferase(Phosphotransferase) domain 1 421 634 - -
Pral5615g00032 636 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Pral5615g00032 636 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515
Pral5615g00032 636 Gene3D Ribonuclease Inhibitor 183 229 IPR032675 -
Pral5615g00032 636 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00032 Pral-Chr5615 205983 209449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00032 6 634 Receptor kinase-like Gene Family AT5G58300 58.281 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5615g00032 Pkinase 1.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00032 - - aprc:113868460 985.711