Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00022 ATGGCCACTGTTTCCCAAGAAAGTAGCTTGCTCTCGCCCAAGAAGGAGAAGATAGATGTCATCGAAGGGCTCGTCCAGGGTTACCAGTCTGCTTCCCAGCTTAAGTTTCTGCTTCAGAAGCCTTTCGATGCTGATGGGACTCTTTCTGCTCATGAACATTTGGCCATAGTTCTTAGATCTTTCACCCACTCTCTTTCTCTTCTCACTTCTTCGTCCTCTGACGTCGAGGTTGCTCAGAATCTGGTGGTTTCCGGTGAGAATGAGCCGCCGGCCGCTGACAATTGCCTTGACCGGAAGTCATCCGATGCGAGCGAGAATAGAGGGAGATCGGCGCCGGCCACCAAGAGCCGGAGGGGTTGCTACAAAAGAAGGAGGACTGAGCAAACGCGGACCGTATTATCTTCCACTGCGGATGATGAGCATGCATGGAGAAAGTACGGACAGAAGGAAATCCTGAATTTCAAATTCCCCAGGAGCTACATGAGGTGCACTCGCAAGTATGAACAAGGTTGTCGGGCAGTCAAGCAGGTGCAGCGAATCCAAGAGAATCCTGAAATGTACCAGATCACGTACATCGGATATCACACATGTAAAGACATCCTTAAGACACCCCAAGTGGTCACAGAATCTGGTAATTGGGAACCATTCTTCGCAGATTCAAAGATTATTCCAAACGAAGTAATAAAGGTCCATCCCATAAAACAAGAGCATCATCATCCCAGAGAGGAGACACCGAGTTATCTCACCAACAGCGGCTTGGACGACCCCATTTTGTGGTCGGACCTTAAGGATCTGTCCGAGGCTGCCATGGTGCCTTTGGGGTCGTCTGATAATGCAGATACTGTGTATTCATGTTCTGGCTCTTTGGATTTCGGGGTGGAATATGATTCTGTTCGTTTTGCCTCTGATGATTTCCACTTCGATGGATAG 930 0.4892 MATVSQESSLLSPKKEKIDVIEGLVQGYQSASQLKFLLQKPFDADGTLSAHEHLAIVLRSFTHSLSLLTSSSSDVEVAQNLVVSGENEPPAADNCLDRKSSDASENRGRSAPATKSRRGCYKRRRTEQTRTVLSSTADDEHAWRKYGQKEILNFKFPRSYMRCTRKYEQGCRAVKQVQRIQENPEMYQITYIGYHTCKDILKTPQVVTESGNWEPFFADSKIIPNEVIKVHPIKQEHHHPREETPSYLTNSGLDDPILWSDLKDLSEAAMVPLGSSDNADTVYSCSGSLDFGVEYDSVRFASDDFHFDG 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00022 309 Gene3D WRKY domain 121 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5615g00022 309 MobiDBLite consensus disorder prediction 85 133 - -
Pral5615g00022 309 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00022 309 ProSiteProfiles WRKY domain profile. 132 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00022 309 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 29 237 IPR044810 GO:0003700
Pral5615g00022 309 Pfam WRKY DNA -binding domain 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00022 309 SUPERFAMILY WRKY DNA-binding domain 135 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00022 Pral-Chr5615 135528 137919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00022 14 208 WRKY Transcription Factor Family AT3G56400 41.872 2.38e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5615g00022 WRKY 1.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00022 - - gmx:100778162 274.248