Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00021 ATGGACGAGGACGTTACTTCTTTGATTCAGAGGGCCTGTGAGTTAGCCAGAAACCTTGAATTGAACCTGCCCAGCGAATCTCGTGATTCGATATTGAGGTGTATTGATGAGATTGTGGCGAAACTGAATGCTGCTAAAGGGAAGTTGATGGCGGTGTCGTCGTCTCGTGACGAAGAAGCTGCGAAGCAGGAAATCATACAGCAGCATCCTTACATGGCTTCTTCTTCAGCTTCTTCGTTCTTGCAAGAATGGCTCTCTGCGAACAATCGGTTTGTCCAAATACCGCAACTTCAAGCGCCGGCGATGACGGCGGCGCCGCCCAGGGGCACACTGCAGATGATGACTGACTTGGGTGCGAGAGATGTAGATGCTTCTGCAGAAGGTGATGTTGAGGCATCTCCTTCGTCTCGACGGCGTAAAAGGAAGGATGATGCAGAGAAGATGACATTCACGGTTCAAGCAGTTCAGTTGGGGAACTCGGATAGTGTCCCACCAGATGATGGCTACACTTGGAGAAAATATGGCCAAAAAGAGATCCTAGGCTCTAATTACCCCAGGAGTTACTTCAGGTGCACCCACCTGAAACTATATCACTGCCTAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAACATGTTTGCAGTAACATATAGAGGAAGCCACACTTGCCACATGTCGTCCACAGCTCCATCTCCTTCAGTTCCACCACCACACCTAATGATCTCACAGCCACAAGACATAGCACACATTAGTACGACTTCTTCCTCCCAATTGTCTCCTTCTTCTGCTTCGGTTCCTGGTTGGTTGCCTTCTGTCCACCTCGGCCTCCTTGCCCGCGGGGGCAGTGGTGGTGGTGTTACTCAGGCTGGTGCCGAGGCTGGCGGCGCCGGCCCCTCCACCTCGAGATTTGGAGCTGATTACCCGGTGGCAGATATGGCTATGGACATGTTTCATTCAGGTTCTAGCAGTGGTAATAATAGCATGGAGTCTCTCTTCGCTTCTGCTGATGAGAAAAATGAAGCAGGCGACAACAAGAAAAGCTAA 1050 0.5048 MDEDVTSLIQRACELARNLELNLPSESRDSILRCIDEIVAKLNAAKGKLMAVSSSRDEEAAKQEIIQQHPYMASSSASSFLQEWLSANNRFVQIPQLQAPAMTAAPPRGTLQMMTDLGARDVDASAEGDVEASPSSRRRKRKDDAEKMTFTVQAVQLGNSDSVPPDDGYTWRKYGQKEILGSNYPRSYFRCTHLKLYHCLAKKQVQRLDNNPNMFAVTYRGSHTCHMSSTAPSPSVPPPHLMISQPQDIAHISTTSSSQLSPSSASVPGWLPSVHLGLLARGGSGGGVTQAGAEAGGAGPSTSRFGADYPVADMAMDMFHSGSSSGNNSMESLFASADEKNEAGDNKKS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00021 349 ProSiteProfiles WRKY domain profile. 160 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00021 349 MobiDBLite consensus disorder prediction 123 146 - -
Pral5615g00021 349 SMART WRKY_cls 165 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00021 349 MobiDBLite consensus disorder prediction 320 349 - -
Pral5615g00021 349 SUPERFAMILY WRKY DNA-binding domain 161 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5615g00021 349 Pfam WRKY DNA -binding domain 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00021 349 Gene3D WRKY domain 150 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5615g00021 349 MobiDBLite consensus disorder prediction 320 335 - -
Pral5615g00021 349 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 60 255 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00021 Pral-Chr5615 130755 133325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00021 3 239 WRKY Transcription Factor Family AT2G40740 41.564 4.33e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5615g00021 WRKY 8.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00021 - - pcin:129297979 446.047