Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00020 ATGGACGAGGACGTTACTTCTTTGATTCAGAGGGCCTGTGAGTTAGCCAGAAACCTTGAATTGAACCTGCCCAGCGAATCTCGTGATTCGATATTGAGGTGTATTGATGAGATTGTGGCGAAACTGAATGCTGCTAAAGGGAAGTTGATGGCGGTGTCGTCGTCTCGTGACGAAGAAGCTGCGAAGCAGGAAATCATACAGCAGCATCCTTACATGGCTTCTTCTTCAGCTTCTTCGTTCTTGCAAGAATGGCTCTCTGCGAACAATCGGTTTGTCCAAATACCGCAACTTCAAGCGCCGGCGATGACGGCGGCGCCGCCCAGGGGCACACTGCAGATGATGACTGACTTGGGTGCGAGAGATGTAGATGCTTCTGCAGAAGGTGATGTTGAGGCATCTCCTTCGTCTCGACGGCGTAAAAGCAGGAAGGATGATGCAGAGAAGATGACATTCACGGTTCAAGCAGTTCAGTTGGGGAACTCGGATAGTGTCCCACCAGATGATGGCTACACTTGGAGAAAATATGGCCAAAAAGAGATCCTAGGCTCTAATTACCCCAGGAGTTACTTCAGGTGCACCCACCTGAAACTATATCACTGCCTAGCGAAGAAACAAGTGCAGCGTCTGGATAATAACCCTAACATGTTTGCAGTAACATATAGAGGAAGCCACACTTGCCACATGTCGTCCACAGCTCCATCTCCTTCAGTTCCACCACCACACCTAATGATCTCACAGCCACAAGACATAGCACACATTAGTACGACTTCTTCCTCCCAATTGTCTCCTTCTTCTGCTTCGGTTCCTGGTTGGTTGCCTTCTGTCCACCTCGGCCTCCTTGCCCGCGGGGGCAGTGGTGGTGGTGTTACTCAGGCTGGTGCCGAGGCTGGCGGCGCCGGCCCCTCCACCTCGAGATTTGGAGCTGATTACCCGGTGGCAGATATGGCTATGGACATGTTTCATTCAGGTTCTAGCAGTGGTAATAATAGCATGGAGTCTCTCTTCGCTTCTGCTGATGAGAAAAATGAAGCAGGCGACAACAAGAAAAGCTAA 1053 0.5052 MDEDVTSLIQRACELARNLELNLPSESRDSILRCIDEIVAKLNAAKGKLMAVSSSRDEEAAKQEIIQQHPYMASSSASSFLQEWLSANNRFVQIPQLQAPAMTAAPPRGTLQMMTDLGARDVDASAEGDVEASPSSRRRKSRKDDAEKMTFTVQAVQLGNSDSVPPDDGYTWRKYGQKEILGSNYPRSYFRCTHLKLYHCLAKKQVQRLDNNPNMFAVTYRGSHTCHMSSTAPSPSVPPPHLMISQPQDIAHISTTSSSQLSPSSASVPGWLPSVHLGLLARGGSGGGVTQAGAEAGGAGPSTSRFGADYPVADMAMDMFHSGSSSGNNSMESLFASADEKNEAGDNKKS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00020 350 Pfam WRKY DNA -binding domain 167 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00020 350 MobiDBLite consensus disorder prediction 321 336 - -
Pral5615g00020 350 SMART WRKY_cls 166 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00020 350 MobiDBLite consensus disorder prediction 123 148 - -
Pral5615g00020 350 SUPERFAMILY WRKY DNA-binding domain 162 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5615g00020 350 Gene3D WRKY domain 151 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5615g00020 350 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 60 256 IPR044810 GO:0003700
Pral5615g00020 350 ProSiteProfiles WRKY domain profile. 161 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5615g00020 350 MobiDBLite consensus disorder prediction 321 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00020 Pral-Chr5615 130755 133325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00020 3 240 WRKY Transcription Factor Family AT2G40740 41.152 4.94e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5615g00020 WRKY 8.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00020 - - pcin:129297979 452.21