Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00017 ATGGCTTCTTCTTCCTCTTCCTCACCAAATTGGGTCATGGAAAATGGAGTTATGCCCCATGTTTTAGCTGTTGATGACAACCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAGGAATTCTTCTTGCAAAGTGACAACTGCAGAAAATGGACCGAGGGCATTGGAATTTCTGGGGTTGGCAAGTGATGAAGAAAGCACCTTGAAGAGCACAGGATCCAAAGTGAATATGATTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGCTACTCAAGAAAATAAAGAAATCGTCAATCATGAAGGAAGTTCCCGTGGTGATAATGTCATCTGAGAACATCCCAACTAGGGTGAACAAGTGTTTGGAGGAAGGTGCTCAGATGTTCATCCAAAAGCCCCTCAAACAATCTGATGTAAAGAAGCTGACATGTCAACTGATGAACTGCAGAGGCTAG 459 0.4357 MASSSSSSPNWVMENGVMPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLASDEESTLKSTGSKVNMIITDYCMPGMTGYELLKKIKKSSIMKEVPVVIMSSENIPTRVNKCLEEGAQMFIQKPLKQSDVKKLTCQLMNCRG 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00017 152 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 147 IPR045279 GO:0009736
Pral5615g00017 152 SUPERFAMILY CheY-like 18 148 IPR011006 -
Pral5615g00017 152 SMART REC_2 19 144 IPR001789 GO:0000160
Pral5615g00017 152 Pfam Response regulator receiver domain 21 142 IPR001789 GO:0000160
Pral5615g00017 152 ProSiteProfiles Response regulatory domain profile. 20 148 IPR001789 GO:0000160
Pral5615g00017 152 Gene3D - 17 150 - -
Pral5615g00017 152 CDD REC_typeA_ARR 21 143 - -
Pral5615g00017 152 FunFam Two-component response regulator ORR5 19 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00017 Pral-Chr5615 113984 114982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00017 20 151 Response Regulator Gene Family AT3G56380 72.932 2.29e-67 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5615g00017 Response_reg 4.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00017 K14492 - qsa:O6P43_020091 244.973