Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00014 ATGCGAGCGGTTTTGAATATGAGAGCTCTTTCCTACCTGTTCTTGTTGCTTCTTATAGATCCGGGGTTGGTGGTGATTTCTGTGAACCCATCCCTGAATGACGACGTTCTGGGTCTGATAGTATTCAAAGCTGATATAAAAGATCCGAAGGGGAAACTGGTAAACTGGAATGAAGATGATGAGAATTCCTGCGGCTGGGTCGGTGTGAAATGCAACCCTAGATCCAACAGAGTCGTCGAGCTTAACCTTGATGGGTTTTCTCTTTCGGGTCGGCTAGGTCGAGGCCTCTTCCAGCTGCAATTTCTGCGCAAACTTTCGCTGGCGAAGAACAATCTCACCGGCAGCGTAAGCCCCAACATTGCTCGGCTCGACAACCTTCGAGTGATCGATTTGAGCGAGAATAATCTCTCCGGCGAACTTCCCGATGATCTTTTCCGACAATGTGGGTCTCTAAGGGCGATTTCATTAGCGAGAAACAAGTTCACGGGGAAAATTCCCTCTAGCTTGAGCTCATGCTCTGCTCTTGCTGCCATTGACCTCTCATTTAACCAGTTTTCGGGTCCCCTTCCCTCTGGTATCTGGACTTTGAGTGGACTAAGGTCACTGGATTTGTCGGATAATTTGTTGGAAGGTGAGATTCCAGAGAGCACTGAAGGATTGAAGAATTTGCGAACGATCAACTTGGCTAGAAATCAGTTGTCTGGGAAGATCCCTGATGGGTTTGGAAGTTGCTTGCTTTTGAGGTCTGTTGATCTCAGTGAGAATTCTCTCTCTGGCAGCCTTCCCGCGGATATGAAGGAGCTCACACTGTGTAGTTATCTTAGTGTTAGCGGAAATGCTTTTTCAGGTGAGATTCCTGAATGGATTGGGGAAATGAAAAGCCTTGAGACATTGGACGTGTCTCTGAATAGATTTTCAGGTAAGGTGCCAAGCTCTATCGGAAATCTTCAGTCATTGAAGACAATGAATTTTTCCGGAAATGGTTTTTCTGGTAACCTGCCAGATTCTATGATAAATTGTACAAGCCTTATAGCCTTAGATGTTAGTCAGAATTCAATGTCAGGAGATCTTCCATCGTGGATTTTTAAGTCAGATTTGCAGAAAGTTTTGGTATCAGAAAATAAATCGCGTGGAGGTCTGAAAAATTCTCTATATTCTTTGGAGGCAGTTGCTGTTCAAAGTCTTCAAACTTTGGATTTATCTGACAATGCATTCTCTGGCAAAATTACATCTGATATCTCAGTCTTGAGCAGCTTGAAGCTCTTGAATTTATCAAAGAACACTCTGAGTGGTCCTATACCAGCTTCCATTGGAGAATTAAAGTCCCTGAATAGTCTTGATTTGAGTGAGAACCGGCTAAATGGAAGCATACCTATGGAAATAGGAGAAGCTGTATCTTTGAAAGAACTGAGATTGAGGAAAAACTATCTAGTAGGAGACATTCCAATCTCAATTGGCAACTGCACTTCTTTGTCGACTTTAATTCTATCACAGAACAGCCTGACTGGTTCAATACCTGCAGCAATTGCAAAACTGACTAATTTACAAGTTGTGGACTTGTCTTTGAACAATTTTACTGGAAACCTTCCCAAGCAATTGGCCAACCTGCCAAATCTTCTCTCCTTTAACATGTCCCATAACAACTTGAAGGGTGAACTACCAGCTGGCCCCTTCTTCAACACCATTTCACCTTCCTATCTTACTGGTAATCCATCTCTCTGTGGTGCTGCTGTCAAGAAATCATGCCCTTCTGTCCTTCCAAAACCCATTGTCCTAAACCCAAACACCACTTCTGATTATGCTCCGGGGTCGTTACCTCCCAATGTTGGTCACAAAAGAATCATTCTCAGCATTTCCGCACTTATTGCCATTGGTGCAGCTGCTGTCATTGTAATTGGTGTCATTGCCATCACTGTTCTTAATCTCCGTGTGCGGTCCTCTGCATCTCAAGCTCCAGCTGCCCTCACATTTTCTGCAGGGGAAGAATTTAGCCATTCCCCAACTACAGATGCCAATTCTGGCAAGCTTGTCATGTTTTCAGGTGAGCCAGACTTTAGCACGGGGGCACATGCTTTGCTTAACAAGGATTGTGAACTCGGGCGTGGCGGGTTTGGAGCAGTATACCAAACAGTTCTTAGAGATGGTCATGCGGTTGCGATCAAGAAGCTCACTGTGTCCAGTCTTGTCAAGTCCCAGGATGATTTTGAGAGAGAAGTGAAAAAACTAGGAAAAGTCAGACACCAAAATCTTGTGGCACTTGAAGGTTACTATTGGACCCCATCCCTACAGCTCCTCATATGTGAGTTTGTTTCTGGTGGCAGTCTGTATAAGCATCTCCATGATGGATCAGGTGGAAATTTCCTCTCGTGGAATGAGAGGTTTAACATAATTCTTGGCACAGCAAAAGCCTTGGCGCATTTGCATCACATGAGCATTATCCATTACAACATCAAGTCAACTAATGTCCTAATTGATGGCTATGGCGAAGCTAAAGTGGGTGACTTTGGCCTAGCAAGATTATTACCAATGCTTGACCGTTATGTTTTGAGCAGCAAAATTCAGAGTGCTCTTGGCTACATGGCACCAGAATTTGCCTGCCGTACCGTGAAGATAACAGAGAAATGCGATGTATATGGGTTTGGAGTTTTGGTCTTGGAAGTGGTAACAGGGAAGAGGCCTGTTGAATACATGGAGGACGATGTGGTGGTGCTTTGTGACATGGTCAGAGGAGCTTTGGATGAAGGAAGGGTGGAAGAATGTATTGATGGGAGGCTGCAGGGAAAATTCCCAGCTGAGGAAGCCATTCCTGTGATGAAACTAGGCTTAATATGTACTTCACAAGTGCCCTCAAACCGACCAGATATGGGAGAGGTAGTCAATATATTGGAGCTAATTAGATGTCCCTCAGAAGGACAAGAAGAGCTTGGATGA 2931 0.4442 MRAVLNMRALSYLFLLLLIDPGLVVISVNPSLNDDVLGLIVFKADIKDPKGKLVNWNEDDENSCGWVGVKCNPRSNRVVELNLDGFSLSGRLGRGLFQLQFLRKLSLAKNNLTGSVSPNIARLDNLRVIDLSENNLSGELPDDLFRQCGSLRAISLARNKFTGKIPSSLSSCSALAAIDLSFNQFSGPLPSGIWTLSGLRSLDLSDNLLEGEIPESTEGLKNLRTINLARNQLSGKIPDGFGSCLLLRSVDLSENSLSGSLPADMKELTLCSYLSVSGNAFSGEIPEWIGEMKSLETLDVSLNRFSGKVPSSIGNLQSLKTMNFSGNGFSGNLPDSMINCTSLIALDVSQNSMSGDLPSWIFKSDLQKVLVSENKSRGGLKNSLYSLEAVAVQSLQTLDLSDNAFSGKITSDISVLSSLKLLNLSKNTLSGPIPASIGELKSLNSLDLSENRLNGSIPMEIGEAVSLKELRLRKNYLVGDIPISIGNCTSLSTLILSQNSLTGSIPAAIAKLTNLQVVDLSLNNFTGNLPKQLANLPNLLSFNMSHNNLKGELPAGPFFNTISPSYLTGNPSLCGAAVKKSCPSVLPKPIVLNPNTTSDYAPGSLPPNVGHKRIILSISALIAIGAAAVIVIGVIAITVLNLRVRSSASQAPAALTFSAGEEFSHSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYQTVLRDGHAVAIKKLTVSSLVKSQDDFEREVKKLGKVRHQNLVALEGYYWTPSLQLLICEFVSGGSLYKHLHDGSGGNFLSWNERFNIILGTAKALAHLHHMSIIHYNIKSTNVLIDGYGEAKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALDEGRVEECIDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00014 976 SUPERFAMILY RNI-like 262 573 - -
Pral5615g00014 976 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 770 971 - -
Pral5615g00014 976 SMART LRR_typ_2 292 316 IPR003591 -
Pral5615g00014 976 SMART LRR_typ_2 123 147 IPR003591 -
Pral5615g00014 976 SMART LRR_typ_2 512 535 IPR003591 -
Pral5615g00014 976 SMART LRR_typ_2 196 219 IPR003591 -
Pral5615g00014 976 SMART LRR_typ_2 536 560 IPR003591 -
Pral5615g00014 976 SMART LRR_typ_2 440 464 IPR003591 -
Pral5615g00014 976 SMART LRR_typ_2 392 416 IPR003591 -
Pral5615g00014 976 SMART LRR_typ_2 220 244 IPR003591 -
Pral5615g00014 976 Gene3D Ribonuclease Inhibitor 309 586 IPR032675 -
Pral5615g00014 976 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Pral5615g00014 976 Pfam Leucine Rich Repeat 222 244 IPR001611 GO:0005515
Pral5615g00014 976 Gene3D Transferase(Phosphotransferase) domain 1 770 974 - -
Pral5615g00014 976 CDD STKc_IRAK 699 965 - -
Pral5615g00014 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 371 482 IPR046959 -
Pral5615g00014 976 ProSiteProfiles Protein kinase domain profile. 693 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5615g00014 976 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Pral5615g00014 976 PRINTS Leucine-rich repeat signature 247 260 - -
Pral5615g00014 976 PRINTS Leucine-rich repeat signature 440 453 - -
Pral5615g00014 976 Gene3D Ribonuclease Inhibitor 33 308 IPR032675 -
Pral5615g00014 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 312 586 - -
Pral5615g00014 976 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
Pral5615g00014 976 Pfam Leucine rich repeat 466 524 IPR001611 GO:0005515
Pral5615g00014 976 Pfam Leucine rich repeat 394 453 IPR001611 GO:0005515
Pral5615g00014 976 SUPERFAMILY Protein kinase-like (PK-like) 696 968 IPR011009 -
Pral5615g00014 976 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 33 311 - -
Pral5615g00014 976 SUPERFAMILY L domain-like 48 375 - -
Pral5615g00014 976 Gene3D Phosphorylase Kinase; domain 1 686 769 - -
Pral5615g00014 976 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 687 769 - -
Pral5615g00014 976 Pfam Protein tyrosine and serine/threonine kinase 695 961 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00014 Pral-Chr5615 90244 94727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00014 11 976 Receptor kinase-like Gene Family AT3G56370 67.835 0.0 1282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pral5615g00014 PK_Tyr_Ser-Thr 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00014 - - qsa:O6P43_014848 1500.72