Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00013 ATGTCATCGGAAGAAATTGGTCTTGCTCCAAATCAGAGGATTGATAATGGTCTTAATTCACCCCTAGTTTTCCAAGACGAGCCCTTGCGTTACAGTAGCGGTGCCCCACAACGTCGGGTTGGGGACCCAGGTTCGAAAACGAGGGAGCTGGCCGGTTTCATTGATGAAAAGATTTTCGCCGTGGATCGTGACCGTTTTTTCGCGGCTCCGGCATTGGAGTTTCGTCGTAATGTTTACGGGGATTGCGCGGACCATCGGAACCCACCGGACGCCCGGAATTGGAATGGGAACGGGAGCACTGCAACTCCGAGCGGCGATGAATCGGACGGCGAGGATGATGAAGACGATGAGGAAGAGGACGACGACGATGTTGTTGAGGGTGGCGCTGAAGTACAAAGACTAGTTGGTGTTAACGATGCAAGCAAAGGGAATTCCAATTCTAATTCAATTAACGATATTAGCAATAACAGCATAAGTGGTGGTAACCTGGCTAGTGCTGCAGATGGAATATCGAACGGAAAAGCTCAACACCATTCGTCCTACGGATCCAGGAGAGAGGTATTGGGGAAGGATGGAGAAATTGGGCAGACGCCGAATAATTCAAGGGGTAACGACGAAGATCATCAGCAAGAAAGGTTAGATAAATCGCAGAGTGCGGTCACGATTGCCGAAACTGATTGTGAGGAGTATTATTCGCACTATCTTCAAGGCACGGAGGGCTCAGCTTCAGTGCACAAACCTATAGGAGGGGAAAATGGTTGTGGATTTAGCGGAAGAAAGGAAGTTATCTATTCAAGCGAGTCAGTCGAGTCATTGAGGGCAGTGCTTTCAGATCCTATAACGGGTGCTCTTATGGATGATGCAATGATATTGCCTTGCGGACATTCCTTTGGCGGAGGAGGAATACAGCATGTTATTAGAATGAAAGCTTGTTGCACTTGTTCCCAACCCATATCTGAAGAATCAATATCTCCAAATCTATCACTTAGGGTTGCTGTGCAGGCATACCATCGGGAAGAGGAGTCACAGTTTTACCGATCATCCAAAAGAAGAAAAGAAAGATTTGATCAGGGTGGTTATGGTGATTCAACAGTTATGGAACAACCAAGAGGAAGAGGTGTTCAATTTCCGTTTGCTGTGATGGATCGGGTTATTATAAAGGGGAACAAGAGGACCCCGCAGCGTTTTGTTGGACGGGAAGCTATTGTAACAACACAATGCCTGAATGGATGGTACGTGGTAAAGACATTGGACAATGCAGAGAGTGTTAAATTGCAGTATCGCTCGCTTGCTAAGGTTTCAGATCTCCGGCAAGGTGGGACATGA 1326 0.4729 MSSEEIGLAPNQRIDNGLNSPLVFQDEPLRYSSGAPQRRVGDPGSKTRELAGFIDEKIFAVDRDRFFAAPALEFRRNVYGDCADHRNPPDARNWNGNGSTATPSGDESDGEDDEDDEEEDDDDVVEGGAEVQRLVGVNDASKGNSNSNSINDISNNSISGGNLASAADGISNGKAQHHSSYGSRREVLGKDGEIGQTPNNSRGNDEDHQQERLDKSQSAVTIAETDCEEYYSHYLQGTEGSASVHKPIGGENGCGFSGRKEVIYSSESVESLRAVLSDPITGALMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPISEESISPNLSLRVAVQAYHREEESQFYRSSKRRKERFDQGGYGDSTVMEQPRGRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDLRQGGT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00013 441 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 436 - -
Pral5615g00013 441 MobiDBLite consensus disorder prediction 1 21 - -
Pral5615g00013 441 MobiDBLite consensus disorder prediction 169 218 - -
Pral5615g00013 441 SUPERFAMILY RING/U-box 267 342 - -
Pral5615g00013 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 341 IPR013083 -
Pral5615g00013 441 ProSiteProfiles U-box domain profile. 271 343 IPR003613 GO:0004842|GO:0016567
Pral5615g00013 441 Pfam U-box domain 277 341 IPR003613 GO:0004842|GO:0016567
Pral5615g00013 441 MobiDBLite consensus disorder prediction 138 155 - -
Pral5615g00013 441 MobiDBLite consensus disorder prediction 28 47 - -
Pral5615g00013 441 MobiDBLite consensus disorder prediction 106 126 - -
Pral5615g00013 441 MobiDBLite consensus disorder prediction 1 19 - -
Pral5615g00013 441 MobiDBLite consensus disorder prediction 85 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00013 Pral-Chr5615 76695 80789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00013 216 435 Plant U-box Gene Family AT5G05230 60.177 2.50e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00013 - - pcin:129302449 691.034