Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5615g00008 ATGTCGTTTCCCAACCATCCTCCTCCTCACTCCTCCTCCTCTCGAGGCCCCTTCCACCGCCGCGCTCAGTCCGAGGGCCAATTCCGATTGCCCGACCACTTCGATCTCGAACCTTGCTTCTTCGATGGCCCTTCCTTCGCCTTTGAAGATCTAGCAGCATCGGAGGAAGACCTCCTCTCCGCCTATATGGATCTTGACAAGTCCGGATCCCAACTTAACTGTGCATTAGCCGACCCCAAACCTGGTACCTCCGACACTAATAATGCCAATGGCGGATCCGTTGGAACTAGCGGTGACGGTGACAAGCCTGCCAGGCCTCGGCATCGGCACAGCAATTCAGCCGATGGGACTTTCGTGCTCGAGGCCATTGACTACAAGAAGGCAATGGCTCCGGATAAGCTTGCCGAATTGTGGATTGTTGATCCTAAGCGAGCAAAGAGGATTCTGGCAAATCGCCAATCTGCCGCTCGTTCAAAAGAGAGGAAAGCGCGCTATGTAGTAGAACTTGAGAAAAAAATTCAATCCCTTCAAACAGAAGCAACCACTCTTTCCGCTCAATTAAATCTTTTCCAGAGAGATACGACTGGTTTGACTAGTGAAAATACAGAACTGAAGCTTCGGTTACAAGCTATGGAGCAACAAGCTAAGTTACGTGATGCTTTAAACGAAGCACTGAAGAAAGAGGTCGATAGGCTTAAGGTTGCTACTGGAGAGACAGTAACTCCAACCTTAACCCAAACCTACAATGTGCAAGCGCATCAAATCCCATACCCTCAAGGTTCTTTCTTCTTACATCAGTCACAGTGTGGACCAGTTGGTGAACCTCAGATTATGCAAATGCAACACTTACATGCACTCTCATCTAGTTTACCAAATCCTCATCAGCCGCCGCTTGCAATAGCCAGCCCGCACGACTTGTCGGAAATGTTGCCTCAGGAATCTATTGGCCAATTTCAGGGGCTTGAGATAAGCACCGGGGGTGCCCCCATTCTGACGCCTGATGGTTCCTCTGGTTCTGTCAAACAAATCAGCAGTGCCTTTTGA 1044 0.4971 MSFPNHPPPHSSSSRGPFHRRAQSEGQFRLPDHFDLEPCFFDGPSFAFEDLAASEEDLLSAYMDLDKSGSQLNCALADPKPGTSDTNNANGGSVGTSGDGDKPARPRHRHSNSADGTFVLEAIDYKKAMAPDKLAELWIVDPKRAKRILANRQSAARSKERKARYVVELEKKIQSLQTEATTLSAQLNLFQRDTTGLTSENTELKLRLQAMEQQAKLRDALNEALKKEVDRLKVATGETVTPTLTQTYNVQAHQIPYPQGSFFLHQSQCGPVGEPQIMQMQHLHALSSSLPNPHQPPLAIASPHDLSEMLPQESIGQFQGLEISTGGAPILTPDGSSGSVKQISSAF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5615g00008 347 Gene3D - 142 194 - -
Pral5615g00008 347 MobiDBLite consensus disorder prediction 1 29 - -
Pral5615g00008 347 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 294 - -
Pral5615g00008 347 MobiDBLite consensus disorder prediction 73 113 - -
Pral5615g00008 347 MobiDBLite consensus disorder prediction 80 95 - -
Pral5615g00008 347 SMART brlzneu 139 203 IPR004827 GO:0003700|GO:0006355
Pral5615g00008 347 CDD bZIP_plant_RF2 144 193 IPR044759 GO:0003700|GO:0006355
Pral5615g00008 347 MobiDBLite consensus disorder prediction 330 347 - -
Pral5615g00008 347 FunFam probable transcription factor PosF21 142 195 - -
Pral5615g00008 347 Coils Coil 208 228 - -
Pral5615g00008 347 Coils Coil 159 193 - -
Pral5615g00008 347 SUPERFAMILY Leucine zipper domain 143 194 IPR046347 GO:0003700|GO:0006355
Pral5615g00008 347 Pfam bZIP transcription factor 143 201 IPR004827 GO:0003700|GO:0006355
Pral5615g00008 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 204 IPR004827 GO:0003700|GO:0006355
Pral5615g00008 347 MobiDBLite consensus disorder prediction 326 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5615g00008 Pral-Chr5615 42489 45780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5615g00008 15 327 bZIP Transcription Factor Family AT2G40620 54.217 1.88e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5615g00008 bZIP_1 5.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5615g00008 - - pcin:129301776 564.688