Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5613g00049 ATGACATTCAAGAGAAGGAACGGCGGACGCAATAAGCATGGGCGTGGACATGTTAAATTCATTCGATGCTCCAACTGTGGTAAATGCTGTCCCAAGGACAAGGCAATCAAGAGGTTCCTTGTGAGGAACATTGTTGAGCAAGCCGCTGTTAGGGATGTTCAGGAAGCATGTGTCTATGAACAATACACGCTCCCCAAGCTGTATGTTAAGATGCAGTATTGTGTTTCCTGTGCTATTCATTCGCATGTCGTGAGAGTTCGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGACCTGGTCAACCTGGTCAAGCTCCTCGCCCTGCTGGAGTAGCTGCTGCTCGTACTTAA 387 0.4987 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPRPGQPGQAPRPAGVAAART 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5613g00049 128 MobiDBLite consensus disorder prediction 89 110 - -
Pral5613g00049 128 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pral5613g00049 128 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pral5613g00049 128 MobiDBLite consensus disorder prediction 86 128 - -
Pral5613g00049 128 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Pral5613g00049 128 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pral5613g00049 128 FunFam 40S ribosomal protein S26 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5613g00049 Pral-Chr5613 274017 276075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5613g00049 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 5.68e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5613g00049 K02976 - gmx:100808790 209.534