Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5613g00043 ATGGTGAATATTTGCTGCAGAACAGTTCGTGTTGTTGCAGCTCTGGGTTTCAGATTTCTTGAAAATAACCGGACCTATTCAAATAGAAACTCTAACGCGAGAAATTTTCGGACCTACTTTGGATTTTCTCTAACTATTTGCCCATCATCTCGATCGAAATCGCCTTCGACTGTACTCTGTAGAATGGACGATACAGCTAGGGTTTCCACTCAGTCCAGTGGAGGGGACGATGTTGTTCGCTTCCCGTTGTCTCCATCGAATGCTTTGGTCATTCAGAAAGGAGACATCACCAAGTGGTCTATCAACGGCTCCTCCGACGCAATAGTGAATCCAGCAAATGAGAGAATGCTTGGAGGTGGCGGCGCAGATGGAGCCATTCACAGAGCTGCTGGGCCAGATCTTCTTCAAGCGTGCTTAAATGTTCCAGAAGTTAGACCTGGAATTCGCTGTCCGACAGGGGAAGCTAGGATCACACCAGGTTTTAAGCTGCCTGCTTCTCATGTTATTCATACCGTTGGACCAGTCTACACTTCAGATAGTAATGCTGCTGCATCTCTAGCAAGTGCTTACAGGAATAGTTTGAAGGTTGCAAAAGAGAACAATATTCAGTATATAGCATTTCCAGCCATATCTTGTGGCGTCTATGGATATCCTTTTGATGAAGCTGCCGCAGTGGCAATATCTACCATCAGAGAGTTTCGAGATGACTTGAAGGAGGTTCACTTCGTTCTGTTCTCGCCTGATATCTATCATGTTTGGATAAACAAAGCGAGCGAGTTGCTGAAAGAGTAG 792 0.4533 MVNICCRTVRVVAALGFRFLENNRTYSNRNSNARNFRTYFGFSLTICPSSRSKSPSTVLCRMDDTARVSTQSSGGDDVVRFPLSPSNALVIQKGDITKWSINGSSDAIVNPANERMLGGGGADGAIHRAAGPDLLQACLNVPEVRPGIRCPTGEARITPGFKLPASHVIHTVGPVYTSDSNAAASLASAYRNSLKVAKENNIQYIAFPAISCGVYGYPFDEAAAVAISTIREFRDDLKEVHFVLFSPDIYHVWINKASELLKE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5613g00043 263 SMART YBR022w_8 88 226 IPR002589 -
Pral5613g00043 263 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 62 260 - -
Pral5613g00043 263 Gene3D Leucine Aminopeptidase, subunit E, domain 1 30 263 IPR043472 -
Pral5613g00043 263 CDD Macro_OAADPr_deacetylase 89 258 - -
Pral5613g00043 263 ProSiteProfiles Macro domain profile. 76 261 IPR002589 -
Pral5613g00043 263 Pfam Macro domain 109 226 IPR002589 -
Pral5613g00043 263 SUPERFAMILY Macro domain-like 88 258 IPR043472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5613g00043 94 199 C2H2 Transcription Factor Family AT5G01310 35.294 4.18e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5613g00043 K23518 - qsa:O6P43_020114 362.844