Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5613g00040 ATGGAGAAAAGGGGGAATGTGCTGATGCAAAAGTACGAGTTTGGCAGGCTACTAGGTCAAGGAAATTTTGCAAAGGTTTACCATGCAAGGGACCTTAGAACTGGTGATAATGTTGCCATTAAAATGATTGATAAGGAGAGGATTCTAAAAGCTGGGCTAGTTGATCAAACAAAGCGGGAAATATCAGTCATGGGACTGGTTAAACATCCAAATGTACTGCAACTTTATGAGGTATTGGCCACCAAAACCAAGATTTACTTCATCATGGAATATGCCAAAGGGGGTGAACTCTTTAAGAAGCTTGCCAAGGGCAGACTCCATGAAAACTTGGCAAGGCATTACTTCCAACAATTGATCAGCGCGATAGATTGTTGCCACAGCAATGGGGTTTATCATAGGGATTTGAAGCCAGAGAATTTACTTTTGGATGAGAATGGAAATCTCAAGGTTGCAGATTTTGGATTGAGTGCCCTTGTTGACTCTCATCGCCAAGGAAGCTTACTGCACACAACTTGTGGAACTCCTGCATATGTAGCTCCTGAAGTTATAAACAAAAAAGGCTATGATGGAGCGAAAGCTGACATATGGTCTTGTGGGGTGATCTTATATGTTTTATTGGCTGGTCAGTTGCCATTCCGTGATGTGAATCTTATCGAATTGTACAGGAAAATATGCAGAGCAAAGTACAGATGTCCAATCTGGTTTTCATTTGAAGCACGCAAGCTGTTGTTCAGAATCCTTGACCCTAACCCCGATACTAGAATTCCCATATCAAAGATTAAGGAAAGCTCTTGGTTTAAAAGAGGATTCAGTTCAAAGGCTGATAAAATGAAAACATCAGTTACAGATGTGGAGGATCCAGTCAAGGCTGATCCAAGTCTTGGTCTATCTGAGAATGAAAGTGGTGCTACTTCTGAGGCTAAGCAATCATTGGTGCAACCTACTAATTTGAATGCTTTTGATATAATTTCTCTATCAGCTGGATTTGATTTGTCTGGGCTTTTTGCAAGAAACAAGGAAAGGAAAGATGTGAAATTTACGTCACTGCACTCTGCCTTGTCTATCGTTTCTGTGATAGAGGGTATGGCTCATGTTATGGGGCTGAAGATAACGAAAATAGATGGAGGGTTGCTGAATTTAGAGAAATCTAGTGAAGGGAGAATGGAGCCTCTGTCCATTGATGCTGAAATTTTTGAGTTTACCCCATCTTTCCATTTGATTGAGATGAAGCAATCTAGTGGTAACACAGTAGAATACCAGAAGATGTTAGAAGAGGAGATCAGACCAGCTCTCAGAGAAATTGTATGGGCTTGGCAAGATGAACAGCAACAGTAG 1335 0.4097 MEKRGNVLMQKYEFGRLLGQGNFAKVYHARDLRTGDNVAIKMIDKERILKAGLVDQTKREISVMGLVKHPNVLQLYEVLATKTKIYFIMEYAKGGELFKKLAKGRLHENLARHYFQQLISAIDCCHSNGVYHRDLKPENLLLDENGNLKVADFGLSALVDSHRQGSLLHTTCGTPAYVAPEVINKKGYDGAKADIWSCGVILYVLLAGQLPFRDVNLIELYRKICRAKYRCPIWFSFEARKLLFRILDPNPDTRIPISKIKESSWFKRGFSSKADKMKTSVTDVEDPVKADPSLGLSENESGATSEAKQSLVQPTNLNAFDIISLSAGFDLSGLFARNKERKDVKFTSLHSALSIVSVIEGMAHVMGLKITKIDGGLLNLEKSSEGRMEPLSIDAEIFEFTPSFHLIEMKQSSGNTVEYQKMLEEEIRPALREIVWAWQDEQQQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5613g00040 444 Gene3D Kinase associated domain 1, KA1 312 437 - -
Pral5613g00040 444 ProSitePatterns Protein kinases ATP-binding region signature. 18 50 IPR017441 GO:0005524
Pral5613g00040 444 FunFam Non-specific serine/threonine protein kinase 312 436 - -
Pral5613g00040 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 431 - -
Pral5613g00040 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pral5613g00040 444 Pfam NAF domain 314 372 IPR004041 GO:0007165
Pral5613g00040 444 Gene3D Phosphorylase Kinase; domain 1 8 93 - -
Pral5613g00040 444 SUPERFAMILY Protein kinase-like (PK-like) 8 282 IPR011009 -
Pral5613g00040 444 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5613g00040 444 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Pral5613g00040 444 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5613g00040 444 CDD CIPK_C 318 432 - -
Pral5613g00040 444 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Pral5613g00040 444 MobiDBLite consensus disorder prediction 281 300 - -
Pral5613g00040 444 FunFam Non-specific serine/threonine protein kinase 6 306 - -
Pral5613g00040 444 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5613g00040 444 Gene3D Transferase(Phosphotransferase) domain 1 94 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5613g00040 Pral-Chr5613 226829 229244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5613g00040 1 444 CBL-interacting serine-threonine protein kinases AT5G58380 57.582 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5613g00040 Pkinase 3.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5613g00040 K07198 - qsa:O6P43_014824 651.744