Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5613g00039 ATGGAGAAAAGGGGGAATGTGCTGATGCAAAAGTACGAGTTTGGCAGGCTACTAGGTCAAGGAAATTTTGCAAAGGTTTACCATGCAAGGGACCTTAGAACTGGTGATAATGTTGCCATTAAAATGATTGATAAGGAGAGGATTCTAAAAGCTGGGCTAGTTGATCAAACAAAGCGGGAAATATCAGTCATGGGACTGGTTAAACATCCAAATGTACTGCAACTTTATGAGGTATTGGCCACCAAAACCAAGATTTACTTCATCATGGAATATGCCAAAGGGGGTGAACTCTTTAAGAAGCTTGCCAAGGGCAGACTCCATGAAAACTTGGCAAGGCATTACTTCCAACAATTGATCAGCGCGATAGATTGTTGCCACAGCAATGGGGTTTATCATAGGGATTTGAAGCCAGAGAATTTACTTTTGGATGAGAATGGAAATCTCAAGGTTGCAGATTTTGGATTGAGTGCCCTTGTTGACTCTCATCGCCAAGGAAGCTTACTGCACACAACTTGTGGAACTCCTGCATATGTAGCTCCTGAAGTTATAAACAAAAAAGGCTATGATGGAGCGAAAGCTGACATATGGTCTTGTGGGGTGATCTTATATGTTTTATTGGCTGGTCAGTTGCCATTCCGTGATGTGAATCTTATCGAATTGTACAGGAAAATATGCAGAGCAAAGTACAGATGTCCAATCTGGTTTTCATTTGAAGCACGCAAGCTGTTGTTCAGAATCCTTGACCCTAACCCCGATACTAGAATTCCCATATCAAAGATTAAGGAAAGCTCTTGGTTTAAAAGAGGATTCAGTTCAAAGGCTGATAAAATGAAAACATCAGTTACAGATGTGGAGGATCCAGTCAAGGCTGATCCAAGTCTTGGTCTATCTGAGAATGAAAGTGGTGCTACTTCTGAGGCTAAGCAATCATTGAAACAAGGAAAGGAAAGATGTGAAATTTACGTCACTGCACTCTGCCTTGTCTATCGTTTCTGTGATAGAGGGTATGGCTCATGTTATGGGGCTGAAGATAACGAAAATAGATGGAGGGTTGCTGAATTTAGAGAAATCTAG 1074 0.4125 MEKRGNVLMQKYEFGRLLGQGNFAKVYHARDLRTGDNVAIKMIDKERILKAGLVDQTKREISVMGLVKHPNVLQLYEVLATKTKIYFIMEYAKGGELFKKLAKGRLHENLARHYFQQLISAIDCCHSNGVYHRDLKPENLLLDENGNLKVADFGLSALVDSHRQGSLLHTTCGTPAYVAPEVINKKGYDGAKADIWSCGVILYVLLAGQLPFRDVNLIELYRKICRAKYRCPIWFSFEARKLLFRILDPNPDTRIPISKIKESSWFKRGFSSKADKMKTSVTDVEDPVKADPSLGLSENESGATSEAKQSLKQGKERCEIYVTALCLVYRFCDRGYGSCYGAEDNENRWRVAEFREI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5613g00039 357 ProSitePatterns Protein kinases ATP-binding region signature. 18 50 IPR017441 GO:0005524
Pral5613g00039 357 FunFam Non-specific serine/threonine protein kinase 6 307 - -
Pral5613g00039 357 SUPERFAMILY Protein kinase-like (PK-like) 8 275 IPR011009 -
Pral5613g00039 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pral5613g00039 357 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Pral5613g00039 357 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5613g00039 357 Gene3D Transferase(Phosphotransferase) domain 1 3 334 - -
Pral5613g00039 357 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5613g00039 357 MobiDBLite consensus disorder prediction 281 308 - -
Pral5613g00039 357 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 291 - -
Pral5613g00039 357 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5613g00039 Pral-Chr5613 226827 229002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5613g00039 1 292 CBL-interacting serine-threonine protein kinases AT5G45820 65.886 2.79e-148 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5613g00039 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5613g00039 K07198 - qsa:O6P43_014824 474.167