Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5613g00031 ATGATCAAACTAATGTTCCAGGAAAATTTTGAAGAGATAGGGAAGAAGATCAAGAGGGAGGGAGATGTTTCATCGCAAATGGGAAGAAGACACATGTTGGGTCCTCCAGGAACCCTGAATACCATAACCCCTTGTGCAGCATGTAAGCTCTTGAGGCGAAGATGTGCTCAGGAATGTCCCTTTTCTCCTTACTTTTCCCCTCATGAGCCCCAAAAATTTGCTTCTGTTCACAAGGTTTTTGGTGCTAGCAACGTCTCCAAGATGCTCATGGAGGTACCAGAGAGTCAAAGAGCGGATGCAGCAAATAGTCTAGTGTATGAGGCAAATGTGAGGCTAAGAGACCCAGTTTACGGATGCATGGGTGCAATTTCTGCTTTGCAGCAGCAAGTTCAATCTTTGCAAGCTGAACTTAATGCAGTAAGAGCTGAAATACTTAAATACAAACTTAGGGAAGCTACTAACATCATACCCTCCTCTCATCATATTCCTGTCCTCCCTAATTCCTCTCGGGCCGTGTCAATCGCCGCTCCACCGCCACCGCCACCTCCGCCGCCGCCGCCTTCTCTTCCTTCTGCTTCTGATTCCTCTTCTTCCATGTATACCCAAGTCCACCAGAGGCCTCCCACCAATTATACCACAATTTCAAGTGACAATATTTCCTATTTTGGTTAA 672 0.4628 MIKLMFQENFEEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKLREATNIIPSSHHIPVLPNSSRAVSIAAPPPPPPPPPPPSLPSASDSSSSMYTQVHQRPPTNYTTISSDNISYFG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5613g00031 223 MobiDBLite consensus disorder prediction 170 223 - -
Pral5613g00031 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 40 200 - -
Pral5613g00031 223 ProSiteProfiles LOB domain profile. 43 144 IPR004883 -
Pral5613g00031 223 MobiDBLite consensus disorder prediction 173 191 - -
Pral5613g00031 223 MobiDBLite consensus disorder prediction 192 223 - -
Pral5613g00031 223 Pfam Lateral organ boundaries (LOB) domain 44 141 IPR004883 -
Pral5613g00031 223 Coils Coil 123 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5613g00031 Pral-Chr5613 189598 191474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5613g00031 29 223 AS2 family AT2G40470 72.081 3.15e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5613g00031 LOB 5.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5613g00031 - - ccaj:109797870 327.02