Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral5613g00027 | ATGAAACAATGGATAATCCTAACGCCTCTCCAGCTTCACCCTCCCATAATTCGATCACTTTCGACATTTAAAAGATGGTATACGCAGCAGTTGGATCAGATGAATGAACATAAACATCAATTAGCCTTCCTTGAAAGCTTTGTTGATGCATTTAGATCACAAACCCACACTGATATAACTGTCACTCCTGGCAACCATGGCCCTCCAATACCTTCCCATAAAGCAGTTCTGGCGACAAGGTCAGAGGTCTTCAAGAACATTTTAGACTCAGATGAATGCAAAGCGGCACCTACTAACAACATTACAATACCCGAATTGAACTACGAAGAGCTAGAGAGTCTTCTGGAGTTTCTCTACAGAGGGAACTTGGGTCCAGAGAAAATGGGGAAGCATGTATTTGCTTTGTCATTGGCAGCTGATAAATATGGGATTGCTTATTTACAGAACCAATGCGAGCAGCATATGCTGAATTCGCTAAGCATCTCTAATGTCCTTGATGTATTGGAGATTGCAGACACCTGTTCCAACCAGAAGTTGAAGGACACTGCTATGAAGTTCTCAGTTGAAAACATTCAGGAGATAGTTTTGTCCTCAAGATATGAAGTCTTTGTGCACAGAAGCCCTCATCTAACGGTGCAACTTTCCAGGGAATCATTGAAGGCTGTCAATGTCAAATGA | 678 | 0.4204 | MKQWIILTPLQLHPPIIRSLSTFKRWYTQQLDQMNEHKHQLAFLESFVDAFRSQTHTDITVTPGNHGPPIPSHKAVLATRSEVFKNILDSDECKAAPTNNITIPELNYEELESLLEFLYRGNLGPEKMGKHVFALSLAADKYGIAYLQNQCEQHMLNSLSISNVLDVLEIADTCSNQKLKDTAMKFSVENIQEIVLSSRYEVFVHRSPHLTVQLSRESLKAVNVK | 225 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral5613g00027 | 225 | Gene3D | Potassium Channel Kv1.1; Chain A | 26 | 159 | IPR011333 | - | |
| Pral5613g00027 | 225 | PANTHER | BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED | 26 | 221 | IPR044784 | - | |
| Pral5613g00027 | 225 | Pfam | BTB/POZ domain | 51 | 158 | IPR000210 | GO:0005515 | |
| Pral5613g00027 | 225 | SMART | BTB_4 | 57 | 159 | IPR000210 | GO:0005515 | |
| Pral5613g00027 | 225 | Gene3D | - | 160 | 224 | - | - | |
| Pral5613g00027 | 225 | SUPERFAMILY | POZ domain | 35 | 157 | IPR011333 | - | |
| Pral5613g00027 | 225 | CDD | BACK | 160 | 197 | - | - | |
| Pral5613g00027 | 225 | ProSiteProfiles | BTB domain profile. | 57 | 127 | IPR000210 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral5613g00027 | Pral-Chr5613 | 150767 | 152183 | Dispersed/Tandem |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | TRAF | Pral5613g00027 | BTB | 2.7e-20 | CL0033 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral5613g00027 | K10523 | - | gmx:100777561 | 250.366 |