Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral5613g00026 | ATGGATTGCTGTGTATGCACAACAATGCCATTGACATTAAGGCCACCCAGGAATACCATATGTGGGGCCTGCTATGAAGGAGCCAGGAGCATTCTTAATATGATGAACAAGCTTGAATCTGATGAAACAATGGATAATCCTAACGCCTCTCCAGCTTCACCCTCCCATAATTCGAGTAAGTCACTTTCGACATTTAAAAGATGGTATACGCAGCAGTTGGATCAGATGAATGAACATAAACATCAATTAGCCTTCCTTGAAAGCTTTGTTGATGCATTTAGATCACAAACCCACACTGATATAACTGTCACTCCTGGCAACCATGGCCCTCCAATACCTTCCCATAAAGCAGTTCTGGCGACAAGGTCAGAGGTCTTCAAGAACATTTTAGACTCAGATGAATGCAAAGCGGCACCTACTAACAACATTACAATACCCGAATTGAACTACGAAGAGCTAGAGAGTCTTCTGGAGTTTCTCTACAGAGGGAACTTGGGTCCAGAGAAAATGGGGAAGCATGTATTTGCTTTGTCATTGGCAGCTGATAAATATGGGATTGCTTATTTACAGAACCAATGCGAGCAGCATATGCTGAATTCGCTAAGCATCTCTAATGTCCTTGATGTATTGGAGATTGCAGACACCTGTTCCAACCAGAAGTTGAAGGACACTGCTATGAAGTTCTCAGTTGAAAACATTCAGGAGATAGTTTTGTCCTCAAGATATGAAGTCTTTGTGCACAGAAGCCCTCATCTAACGGTGCAACTTTCCAGGGAATCATTGAAGGCTGTCAATGTCAAATGA | 804 | 0.4241 | MDCCVCTTMPLTLRPPRNTICGACYEGARSILNMMNKLESDETMDNPNASPASPSHNSSKSLSTFKRWYTQQLDQMNEHKHQLAFLESFVDAFRSQTHTDITVTPGNHGPPIPSHKAVLATRSEVFKNILDSDECKAAPTNNITIPELNYEELESLLEFLYRGNLGPEKMGKHVFALSLAADKYGIAYLQNQCEQHMLNSLSISNVLDVLEIADTCSNQKLKDTAMKFSVENIQEIVLSSRYEVFVHRSPHLTVQLSRESLKAVNVK | 267 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral5613g00026 | 267 | CDD | BACK | 202 | 239 | - | - | |
| Pral5613g00026 | 267 | SUPERFAMILY | POZ domain | 77 | 199 | IPR011333 | - | |
| Pral5613g00026 | 267 | MobiDBLite | consensus disorder prediction | 41 | 61 | - | - | |
| Pral5613g00026 | 267 | ProSiteProfiles | BTB domain profile. | 99 | 169 | IPR000210 | GO:0005515 | |
| Pral5613g00026 | 267 | Pfam | BTB/POZ domain | 93 | 200 | IPR000210 | GO:0005515 | |
| Pral5613g00026 | 267 | Gene3D | - | 202 | 266 | - | - | |
| Pral5613g00026 | 267 | Gene3D | Potassium Channel Kv1.1; Chain A | 68 | 201 | IPR011333 | - | |
| Pral5613g00026 | 267 | SMART | BTB_4 | 99 | 201 | IPR000210 | GO:0005515 | |
| Pral5613g00026 | 267 | PANTHER | BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED | 20 | 263 | IPR044784 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral5613g00026 | Pral-Chr5613 | 150767 | 152971 | Tandem |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | TRAF | Pral5613g00026 | BTB | 4.1e-20 | CL0033 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral5613g00026 | K10523 | - | gmx:100777561 | 324.709 |