Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5613g00020 ATGTCGCCGGCAGCCGGAATGCACGTCCCTCTCTTGCCAGAAGGCAAAGTTTTAGTAAAGCCAGCCTCCGTCTCTGGCGCGGTCTTCAATGTGGCTACCAGTATAATTGGCGCCGGGATCATGTCGATTCCGGCGACCTTGAAGGTTCTGGGTGTAATCCCGGCCTTCGTGATGATCCTGGTCATCGGTCTCCTTGCCGAAGTTTCAGTGGACTTCCTCATGAGGTTTTCGCATTCCGGCAACACCACCACTTATGCTGGAGTGATGAGGGAGGCTTTCGGGCCGGCCGGAGCATTTGCCGCGCAAATTTGTGTAATGATCACAAATCTTGGGTGTTTAATTATGTACCTCATTATCATCGGGGATGTGCTATCTGGAAATTCACCTGGAGGCGAGGTTCACTTGGGGATTCTGCAACAATGGTTAGGAATTCACTGGTGGACTTCACGGGAGTTTGCTCTGCTCGTGATAGTCTTCGTCATGCTTCCATTGGTCCTGTATCGTCGTCTGGAGTCCTTAAGGTTCAGTTCTGCAATATCAACTCTTCTAGCAGTGGCGTTCGTGGGCATATGTTCTGGGATGGCAATCACTGCTCTGATGGCAGGAAAAACATATCGTCCGAGACTGCTCCCCGAGTTAAACAGCCACACCTCTTTTTTTGATCTATTCACAGCTGTTCCAGTCATAGTCACTGCCTTCACCTTTCACTTCAACGTGCATCCAATTGGGTTTGAACTTGCCCAGCCATCTGATATGACAGTAGCAGTTCGAATAGCATTAGTTTTATGTGGTGCCATATACTTTGCGATAGGCCTATTTGGGTACCTTCTATTTGGGGATTCAACACAATCAGACATACTCATAAACTTTGATCAGAATACTGCTGGTTCTGCGACTGGGTCCTTGCTCAATACCCTAGTCCGTTTAAGCTATGCCTTTCATATCATGTTGGTGTTTCCTCTCTTGAACTTCTCTCTGAGAGCCAACATAGACGAGCTTCTCTTCCCCAAGAAGCCTCTGCTTGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGTTCTCCTCGTCTTCAGCTACCTCATCGCCATCGCTTTCCCTGATATTTGGTACTTCTTTCAGTTCGTGGGATCAACTTCCGCAGTGTGCCTCGCCTTCATCTTTCCTGGTTCTCTCGCTCTTAGGGATGCTCATGGTATATCGAAAAGAAACGACAAGATCACAGCACTGATAATGATCATCCTGGCTATAATAACAAGTGTCATCGCCATTTCCACCAACATATACCACCTTTTCAGCAGCAAATCATAG 1311 0.4767 MSPAAGMHVPLLPEGKVLVKPASVSGAVFNVATSIIGAGIMSIPATLKVLGVIPAFVMILVIGLLAEVSVDFLMRFSHSGNTTTYAGVMREAFGPAGAFAAQICVMITNLGCLIMYLIIIGDVLSGNSPGGEVHLGILQQWLGIHWWTSREFALLVIVFVMLPLVLYRRLESLRFSSAISTLLAVAFVGICSGMAITALMAGKTYRPRLLPELNSHTSFFDLFTAVPVIVTAFTFHFNVHPIGFELAQPSDMTVAVRIALVLCGAIYFAIGLFGYLLFGDSTQSDILINFDQNTAGSATGSLLNTLVRLSYAFHIMLVFPLLNFSLRANIDELLFPKKPLLATDNKRFVILTLVLLVFSYLIAIAFPDIWYFFQFVGSTSAVCLAFIFPGSLALRDAHGISKRNDKITALIMIILAIITSVIAISTNIYHLFSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5613g00020 436 PANTHER AMINO ACID TRANSPORTER 20 419 - -
Pral5613g00020 436 Pfam Transmembrane amino acid transporter protein 21 427 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5613g00020 Pral-Chr5613 125138 127574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5613g00020 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.000 4.91e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5613g00020 - - gmx:100813056 667.151