LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5613g00019	ATGTCGCCGGCAGCCGGAATGCACGTCCCTCTCTTGCCAGAAGGCAAAGTTTTAGTAAAGCCAGCCTCCGTCTCTGGCGCGGTCTTCAATGTGGCTACCAGTATAATTGGCGCCGGGATCATGTCGATTCCGGCGACCTTGAAGGTTCTGGGTGTAATCCCGGCCTTCGTGATGATCCTGGTCATCGGTCTCCTTGCCGAAGTTTCAGTGGACTTCCTCATGAGGTTTTCGCATTCCGGCAACACCACCACTTATGCTGGAGTGATGAGGGAGGCTTTCGGGCCGGCCGGAGCATTTGCCGCGCAAATTTGTGTAATGATCACAAATCTTGGGTGTTTAATTATGTACCTCATTATCATCGGGGATGTGCTATCTGGAAATTCACCTGGAGGCGAGGTTCACTTGGGGATTCTGCAACAATGGTTAGGAATTCACTGGTGGACTTCACGGGAGTTTGCTCTGCTCGTGATAGTCTTCGTCATGCTTCCATTGGTCCTGTATCGTCGTCTGGAGTCCTTAAGGTTCAGTTCTGCAATATCAACTCTTCTAGCAGTGGCGTTCGTGGGCATATGTTCTGGGATGGCAATCACTGCTCTGATGGCAGGAAAAACATATCGTCCGAGACTGCTCCCCGAGTTAAACAGCCACACCTCTTTTTTTGATCTATTCACAGCTGTTCCAGTCATAGTCACTGCCTTCACCTTTCACTTCAACGTGCATCCAATTGGGTTTGAACTTGCCCAGCCATCTGATATGACAGTAGCAGTTCGAATAGCATTAGTTTTATGTGGTGCCATATACTTTGCGATAGGCCTATTTGGGTACCTTCTATTTGGGGATTCAACACAATCAGACATACTCATAAACTTTGATCAGAATACTGCTGGTTCTGCGACTGGGTCCTTGCTCAATACCCTAGTCCGTTTAAGCTATGCCTTTCATATCATGTTGGTGTTTCCTCTCTTGAACTTCTCTCTGAGAGCCAACATAGACGAGCTTCTCTTCCCCAAGAAGCCTCTGCTTGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGTTCTCCTCGTCTTCAGCTACCTCATCGCCATCGCTTTCCCTGATATTTGGTACTTCTTTCAGTTCGTGGGATCAACTTCCGCAGTGTGCCTCGCCTTCATCTTTCCTGGTTCTCTCGCTCTTAGGGATGCTCATGGTATATCGAAAAGAAACGACAAGATCACAGCACTGATAATGATCATCCTGGCTATAATAACAAGTGTCATCGCCATTTCCACCAACATATACCACCTTTTCAGCAGCAAATCATAG	1311	0.4767	MSPAAGMHVPLLPEGKVLVKPASVSGAVFNVATSIIGAGIMSIPATLKVLGVIPAFVMILVIGLLAEVSVDFLMRFSHSGNTTTYAGVMREAFGPAGAFAAQICVMITNLGCLIMYLIIIGDVLSGNSPGGEVHLGILQQWLGIHWWTSREFALLVIVFVMLPLVLYRRLESLRFSSAISTLLAVAFVGICSGMAITALMAGKTYRPRLLPELNSHTSFFDLFTAVPVIVTAFTFHFNVHPIGFELAQPSDMTVAVRIALVLCGAIYFAIGLFGYLLFGDSTQSDILINFDQNTAGSATGSLLNTLVRLSYAFHIMLVFPLLNFSLRANIDELLFPKKPLLATDNKRFVILTLVLLVFSYLIAIAFPDIWYFFQFVGSTSAVCLAFIFPGSLALRDAHGISKRNDKITALIMIILAIITSVIAISTNIYHLFSSKS	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5613g00019	436	PANTHER	AMINO ACID TRANSPORTER	20	419	-	-
	Pral5613g00019	436	Pfam	Transmembrane amino acid transporter protein	21	427	IPR013057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5613g00019	Pral-Chr5613	125138	127574	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5613g00019	1	431	Amino Acid or Auxin Permease AAAP Family	AT3G56200	60.000	4.91e-179	505

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5613g00019	-		-	gmx:100813056	667.151