Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5613g00003 ATGGGGGTGGTGCATCGTCGTCCAGGAAATGGAATAATCTCCGTCGATTTCGACGGCAAAGGAAACATGAACATTTGTGTCTACAATGACAGAAGTCCAGGTTCTAACGGCTTCTTCTTTGGGGACAGACCATTCGACTTCTCACTTCCGGTCACCTTATTCCAAGTCTTCTTCATCGTCCTCTTCTCCCAGCTCATCTTCTTCGTCCTCAGGCCTATCAGAACACCCAGATACATGTGCCAGGCCGGCATTTTGGTGGGACCTTCGTTTCTGGGGAACAACAGGGTATTCAAGGAGCAAGTGTTCATGGCCAGACAAGTTAGTGTGCTGGCGGTAGCTTCATTAATAGGACTCATATACGCACTTTTCATCCTCGCACTGAAAATGGACATAATATTGACTTTAAGATCGGCGAGAAGAACATGGAAGCTGGGTATAATATCCTCCTTGTTCAGTTTCTGGGTTATGTTAGGGCTTATCTACATGTACAGCCCCGAGAGCCTCCCAGATCTTCCAAGCGCACGTGATCGCATCCTTTTCTGTGTCAATGCCTCGTTGAGTAATTTCGCAGTCATCTCCCAATCCTTGATGGATCTCAACCTTATAACCTCCGAACTAGGTCAGATCGCTTTATCTGCGGCCATGATAAACGATATAGTACACGCGCTTTCCTATCTGGCATTGTATCTCGTCCACAGCAAAGAAGAGGGATCCCAAGCGCATTCACTTTTTCTCATATTGGTGAGCTTTTGGGGATTCGTGGGTTCATGCGTATTCATAGTACGCCCAGCATTGCTCGTGATTGCCAGAAAAACTCCGACGGGGAAACCTGTGAAAAAGGCATACGTTGTGTTGATACTCACGAGTGTGCTGGCTATGGCATTTATCTCGGACGTTATTGGTTTGTCTTTTCTCTTTGGCCCAATGTTCTTCGGTTTAATTATGCCCAATGGCCCTCCTCTGGGTACCACGATCCTGGAGAAAACTGAGAGTTTGGTGAACGAGTTCTTTCTCCCTTTGTCCTGGGCTTTCGTGGGCCAGAAGATTAATGTGTTTGGAATCTGGAATTGGGATGTGGTTTCCAGGATTAACTTCGTCATTATCGCGGGATACGTCGCCAAAGTGATTGGGTGCATTCTAATTTCACTGACCTACAAAATTAGGCCCAAACATGGCCTCATCCTCGGTCTCATACTCAACATGAAGGGCATTGTCGAGATCATCAATTATACCCGAATGAAGAGAGTTGAGATCTTGGACGACCAACTGTACTATTTTATGGTTTTCTCTACGGTGCTAACGTGTGCAATTCTGCATCCTTTTATTGACCTCCTATACAAGCCTTATACTCGATTGGATAATCACAGTAAACGTTACCGACCAATAAGAACGATACAAAATAGTTACAGAAACCCTGAGTTTTGCATCATATGTTGCATACACAGTGAAGGCAATGTTCGAAGCCTCATGACCCTAATAGAAGCTTGCAACCCAGTTCTGTCAAGTGCAATTTGTGCCTACGTGGTGCATCTCGTCGAGCTCCTAGGTAAAAGCACGCCTTTTCTCCTCCCGGTGAACTTGAAAAGAAGAAGATTCTCTTCATTCAACTACCCCATCACCCTCCACATCATGCGAGCCTTCGAGAACTACGCAGGTAACACCGATGGTCTGGTCACTGTCATGCCCTTCATCAACGTCGCGCCCTACAAGAACATGCACGAAGCTGTGTGCAACCTCGCACAGGACAAGCTTATCTCCTTCATAGTCCTTCCCTTCCACGAGAACGACCAGTCGCGTGGCAGTCTCATGACCGTCACGATCCGCGACCTCAACCGAAACTTCCAGTTCTACGCGCCATGCACGGTGGGCATCCTGGTGGACCGGTTCTCGCAGCTGAGCATCAGCACGTCCGCAGGGCTCACCTTCCACGTGGCCATCTTCTTCCTCGGAGGAGCCGACGACCGGGAGGCTCTGGCATTAGGGAACCGAATGTCAGACCGGCCCAACGTAAGGATCTCGTTGTTTTACTTTGTGGTGAGGAACGATTACTTGAGAGATGGAAGTAGTTACAGCAAAAAGGACGATGAAAGTGACATGTTTAGTTGCAGATATGAAGGAGAAGGTGAAGAGGAAGAAAGGGCGTGGGACGAGAGTGCGATAGATGAGTTCAAGGCGAAGAGCTTAGGGAATGGGAATGTGTTTTGTGAGGAGATAGAGGTGGAGGATGGGATAAGGGTATTGGAAACAATAAGAAGATTGGAGGGAAACTATGATCTGGTCATGGTGGGGCAGAGACACAGTATGGAGGGTTTGGACGATCAAGGGATGTGCAATTTCATGGAGAATGTGGAGACCTTAGGGATCGTTGGGGATATGTTGGCGTCCACAGAGTTCTGTAATGGCATGGTTCCTATCTTGGTCATGCGATCTGCTGTGCAGCAATTGAAAAGGAATAATAGCTTAAGTTCCATCGCCATCTCTCAAGGCAGTTTTCTTTGA 2499 0.4754 MGVVHRRPGNGIISVDFDGKGNMNICVYNDRSPGSNGFFFGDRPFDFSLPVTLFQVFFIVLFSQLIFFVLRPIRTPRYMCQAGILVGPSFLGNNRVFKEQVFMARQVSVLAVASLIGLIYALFILALKMDIILTLRSARRTWKLGIISSLFSFWVMLGLIYMYSPESLPDLPSARDRILFCVNASLSNFAVISQSLMDLNLITSELGQIALSAAMINDIVHALSYLALYLVHSKEEGSQAHSLFLILVSFWGFVGSCVFIVRPALLVIARKTPTGKPVKKAYVVLILTSVLAMAFISDVIGLSFLFGPMFFGLIMPNGPPLGTTILEKTESLVNEFFLPLSWAFVGQKINVFGIWNWDVVSRINFVIIAGYVAKVIGCILISLTYKIRPKHGLILGLILNMKGIVEIINYTRMKRVEILDDQLYYFMVFSTVLTCAILHPFIDLLYKPYTRLDNHSKRYRPIRTIQNSYRNPEFCIICCIHSEGNVRSLMTLIEACNPVLSSAICAYVVHLVELLGKSTPFLLPVNLKRRRFSSFNYPITLHIMRAFENYAGNTDGLVTVMPFINVAPYKNMHEAVCNLAQDKLISFIVLPFHENDQSRGSLMTVTIRDLNRNFQFYAPCTVGILVDRFSQLSISTSAGLTFHVAIFFLGGADDREALALGNRMSDRPNVRISLFYFVVRNDYLRDGSSYSKKDDESDMFSCRYEGEGEEEERAWDESAIDEFKAKSLGNGNVFCEEIEVEDGIRVLETIRRLEGNYDLVMVGQRHSMEGLDDQGMCNFMENVETLGIVGDMLASTEFCNGMVPILVMRSAVQQLKRNNSLSSIAISQGSFL 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5613g00003 832 PANTHER CATION/H + ANTIPORTER 30 809 - -
Pral5613g00003 832 Pfam Sodium/hydrogen exchanger family 57 440 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral5613g00003 832 Gene3D - 51 455 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5613g00003 Pral-Chr5613 29306 32029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5613g00003 22 821 Antiporter Super Family AT2G13620 32.673 7.49e-139 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5613g00003 - - pcin:129300274 1263.06