Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5610g00001 ATGGAAGACATGAATCCCCTTGTTTATGTGGATGTCTCGATATGCAGCGACAGCCATCAAAGGATGATTTTTGAGCTATACTATGACATTGCGCCCTTTGCTGCAGAAAATTTCCGTGCGCTATGTACAGGAGAAAAGGGAGTCAGCTCAAAAACTGGAGACTCTCTGTGGTACAAGCGTGCTTTCTTTCATGACGTTAATCAAGAAAATTATGTGAAGGGAGGTGCTTATTGCTTTCAATATGCGACAGGCGGAGAAAGCATATATGGTTCAAAATTTCCAGATGAGCCGAAAACAGACAATCAGCTTGGGCATCATGAAAGAGGTCTTTTATCCATCGAGACCAATGATCGCAAAGATGGACGTTCTCATTTTGTCATCACCTTGAAACCTGATGATAACCTTGACAGGACTCATGTGGTCTTTGGGAAGCTTATCCAAGGGCTTGAAACACTTGCGAAGATTGAAAGATATGGTCCCTTCATGCCTATTCAAATAGTAGATTGTGGTGAATATAATGGAAATGACTCCGATGCTGAGGACGACACAGGATGCTCCTCGTTTGGAAGACTCAATGAAGGGCAATTAATAGGGGATGAAGACGAAGACAGAAGGTTCAAATCACATCCATAA 633 0.425 MEDMNPLVYVDVSICSDSHQRMIFELYYDIAPFAAENFRALCTGEKGVSSKTGDSLWYKRAFFHDVNQENYVKGGAYCFQYATGGESIYGSKFPDEPKTDNQLGHHERGLLSIETNDRKDGRSHFVITLKPDDNLDRTHVVFGKLIQGLETLAKIERYGPFMPIQIVDCGEYNGNDSDAEDDTGCSSFGRLNEGQLIGDEDEDRRFKSHP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5610g00001 210 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 171 - -
Pral5610g00001 210 Gene3D - 1 177 IPR029000 -
Pral5610g00001 210 MobiDBLite consensus disorder prediction 178 210 - -
Pral5610g00001 210 SUPERFAMILY Cyclophilin-like 4 174 IPR029000 -
Pral5610g00001 210 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 9 171 IPR002130 GO:0000413|GO:0003755
Pral5610g00001 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Pral5610g00001 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 IPR002130 GO:0000413|GO:0003755
Pral5610g00001 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 26 41 IPR002130 GO:0000413|GO:0003755
Pral5610g00001 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 75 IPR002130 GO:0000413|GO:0003755
Pral5610g00001 210 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 16 170 IPR002130 GO:0000413|GO:0003755
Pral5610g00001 210 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5610g00001 Pral-Chr5610 30579 39486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5610g00001 18 172 U-box Gene Family AT5G67530 32.298 9.61e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5610g00001 K09566 - gmx:100800303 187.578