Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5607g00007 ATGGGCGAACTTGTGATAGATATATGCGCTACAAACATGTGTGTGTGTGCTTTTACCGAGAGTCTGATGGCAGAAGACACTAAATTAAAAGACCTTTTCGATGAAATTAGAAGCTTAACAGAGTTGGGCAATCATAAAGACTATGAATATACAACACGTATGGACCATTTTGAGACTCACCTGGTTGAGATGAAGACTTTCTTGGTTGAGATACCAAGAGGGATGTTGAGCCTTAACCATGCACTTGCCATTCCAATGAAGCAGCCCAGTTCTGACTTTCTAATGGCTGCAAATCTCACCAATGGAGCGATAAGGAGGATGATGAGTGACTATTACTCTTGCGAGGACCTAAAGCCTATACTTCAAGTGATTGACTTGAAGTTGGTGCAGTTACAAGAGCATAACAACACAGAAAGGTATAAGCTTTTGCTATCAGATGGTTCCCATTACCAATAA 456 0.4079 MGELVIDICATNMCVCAFTESLMAEDTKLKDLFDEIRSLTELGNHKDYEYTTRMDHFETHLVEMKTFLVEIPRGMLSLNHALAIPMKQPSSDFLMAANLTNGAIRRMMSDYYSCEDLKPILQVIDLKLVQLQEHNNTERYKLLLSDGSHYQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5607g00007 151 Pfam Replication factor-A protein 1, N-terminal domain 99 149 IPR007199 GO:0003677|GO:0005634|GO:0006260
Pral5607g00007 151 SUPERFAMILY Nucleic acid-binding proteins 95 150 IPR012340 -
Pral5607g00007 151 Gene3D - 97 151 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5607g00007 Pral-Chr5607 161084 162860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5607g00007 95 148 Core DNA Replication Machinery Family AT5G45400 46.552 1.68e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5607g00007 K07466 - jre:109004017 69.707