Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5607g00001 ATGAAGTTGGAGAACTCAAACGGAGAGATCTTCGCCGAAAACAATGCCTCTGAATCCCTTGTCAGCTTCGCCAATGGTCTTCAATCGCCAAATTCTGCTACGGCCAATGGGGCCGATGTCGATAAAGATGGGGAGGAGATATTCGTGCCTCCTCTGAACTTCGCCATGGTCGATAATGGCATTTTCAGGGCGGGGTTCCCTGATTCTGCCAATTTCGGATTCTTGAAATCTCTTCGCCTCCGCTCGGTTATATGTTTGTGCCCTGAACCGTATCCAGAAGCGACTTCCGAATTTTTGAAGGCTAATGGAATAAGGCTCTATCAATTTGGGATCGATGCCTTCAAGGAACCTTTTGTTAACATCCCAGAGCATACGGTGCGTGAAGCGTTGCAAGTAGTACTTGATGTTAGGAACCACCCGGTGCTGATTCATTGCAAACGAGGAAAGCATCGCACTGGATGCATAGTGGGATGCTTAAGGAGATTGCAGAGATGGTGTCTATCATCTGTATTTGATGAGTACCAAAGGTTCGCTGCTGCCAAAGCTAGAGTGTCTGATCAGAGGTTTATAGAATTGTTTGACATCTCTAGCTTGAAGAACAATCCAATGTCTTTCTCATGCTCAAAGAAGTAG 633 0.4613 MKLENSNGEIFAENNASESLVSFANGLQSPNSATANGADVDKDGEEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRSVICLCPEPYPEATSEFLKANGIRLYQFGIDAFKEPFVNIPEHTVREALQVVLDVRNHPVLIHCKRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISSLKNNPMSFSCSKK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5607g00001 210 CDD PFA-DSP_Siw14 48 194 - -
Pral5607g00001 210 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 195 IPR029021 -
Pral5607g00001 210 Pfam Tyrosine phosphatase family 49 201 IPR004861 -
Pral5607g00001 210 ProSitePatterns Tyrosine specific protein phosphatases active site. 143 153 IPR016130 GO:0016311|GO:0016791
Pral5607g00001 210 PANTHER TYROSINE-PROTEIN PHOSPHATASE 44 201 - -
Pral5607g00001 210 PRINTS Plant and fungal dual specificity phosphatase signature 48 65 IPR020428 GO:0016791
Pral5607g00001 210 PRINTS Plant and fungal dual specificity phosphatase signature 104 118 IPR020428 GO:0016791
Pral5607g00001 210 PRINTS Plant and fungal dual specificity phosphatase signature 85 98 IPR020428 GO:0016791
Pral5607g00001 210 PRINTS Plant and fungal dual specificity phosphatase signature 121 135 IPR020428 GO:0016791
Pral5607g00001 210 ProSiteProfiles Dual specificity protein phosphatase domain profile. 53 207 IPR020422 GO:0006470|GO:0008138
Pral5607g00001 210 Gene3D Protein tyrosine phosphatase superfamily 47 197 IPR029021 -
Pral5607g00001 210 FunFam probable tyrosine-protein phosphatase At1g05000 47 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5607g00001 Pral-Chr5607 411 4232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5607g00001 28 210 Protein tyrosine phosphatase (PTP) family AT4G03960 69.945 2.45e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5607g00001 K18045 - qsa:O6P43_031297 321.242