LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5606g00007	ATGAAGTTGGAGAACTCAAACGGAGAGATCTTCGCCGAAAACAATGCCTCTGAATCCCTTGTCAGCTTCGCCAATGGTCTTCAATCGCCAAATTCTGCTACGGCCAATGGGGCCGATGTCGATAAAGATGGGGAGGAGATATTCGTGCCTCCTCTGAACTTCGCCATGGTCGATAATGGCATTTTCAGGGCGGGGTTCCCTGATTCTGCCAATTTCGGATTCTTGAAATCTCTTCGCCTCCGCTCGGTTATATGTTTGTGCCCTGAACCGTATCCAGAAGCGACTTCCGAATTTTTGAAGGCTAATGGAATAAGGCTCTATCAATTTGGGATCGATGCCTTCAAGGAACCTTTTGTTAACATCCCAGAGCATACGGTGCGTGAAGCGTTGCAAGTAGTACTTGATGTTAGGAACCACCCGGTGCTGATTCATTGCAAACGAGGAAAGCATCGCACTGGATGCATAGTGGGATGCTTAAGGAGATTGCAGAGATGGTGTCTATCATCTGTATTTGATGAGTACCAAAGGTTCGCTGCTGCCAAAGCTAGAGTGTCTGATCAGAGGTTTATAGAATTGTTTGACATCTCTAGCTTGAAGAACAATCCAATGTCTTTCTCATGCTCAAAGAAGTAG	633	0.4613	MKLENSNGEIFAENNASESLVSFANGLQSPNSATANGADVDKDGEEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRSVICLCPEPYPEATSEFLKANGIRLYQFGIDAFKEPFVNIPEHTVREALQVVLDVRNHPVLIHCKRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISSLKNNPMSFSCSKK	210

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5606g00007	210	CDD	PFA-DSP_Siw14	48	194	-	-
	Pral5606g00007	210	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	48	195	IPR029021	-
	Pral5606g00007	210	Pfam	Tyrosine phosphatase family	49	201	IPR004861	-
	Pral5606g00007	210	ProSitePatterns	Tyrosine specific protein phosphatases active site.	143	153	IPR016130	GO:0016311\|GO:0016791
	Pral5606g00007	210	PANTHER	TYROSINE-PROTEIN PHOSPHATASE	44	201	-	-
	Pral5606g00007	210	PRINTS	Plant and fungal dual specificity phosphatase signature	48	65	IPR020428	GO:0016791
	Pral5606g00007	210	PRINTS	Plant and fungal dual specificity phosphatase signature	104	118	IPR020428	GO:0016791
	Pral5606g00007	210	PRINTS	Plant and fungal dual specificity phosphatase signature	85	98	IPR020428	GO:0016791
	Pral5606g00007	210	PRINTS	Plant and fungal dual specificity phosphatase signature	121	135	IPR020428	GO:0016791
	Pral5606g00007	210	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	53	207	IPR020422	GO:0006470\|GO:0008138

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5606g00007	Pral-Chr5606	79729	83382	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5606g00007	28	210	Protein tyrosine phosphatase (PTP) family	AT4G03960	69.945	2.45e-97	280

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5606g00007	K18045		-	qsa:O6P43_031297	321.242

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