Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5604g00016 ATGGCAACTTTTACGACTTCTCCCAGCGTTCGGCAGGAAAAATATGATGTTTTTGTAAGTTTTAGAGGTCCAGACACCCGACGTAGATTTGTTAGCCATTTGAGAAAGCAGTTTCGACAAAAGGGGATAGAGGTTTATGTTGATGAGACGGCAGAGAGAGGAGATACAATATCACCTGCGCTTTCGGAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCAGAAACTATGCCTCTTCAAGACCCATCACATGTTAGGCATCAAAGAGGGTCTTATGAAGATGCATTTGTTCAGCATCATAACTGCAAAGTTGATTCAAGGAAGTTGCAAGATTGGAGATCGGTTTTGAAAGAGACTGCAGACATATTTGGTTATCATAATTCCTCAGATTTTCAGAATGAATCTGACCTTATTGATGCAATAATCGAAGATGTATCAAAAAAGCTAGAAGGTAAAGACACAATGGAGCCAAAGCACCTAATTGGAATTGAGAAAGATTTGACTGCTATTGAATTATTTATAAAAGATGAATCACACGAAGTTAGAGTTCTTGGAATTTGGGGCAAAGGAGGAATAGGCAAAACCAGCTTAGCTCGTGCCGCATTTGATAACTTTTACCACCAATTTGATAGGTCTTGCTTTGCCGAAAATGTGAGAGAGAAATCAAAAACGATTGGAACGAATTGTTTGCTTGAAAAAATTCTCTCTGTTCTACTAGATGAAGAAAAGCTCACAATGGTTGGAATGCCTAATGTTCAAAGGAGGCTACGTAGAACAAGAGTTCTTCTAGTTCTTGATGATGTAGACACGCTTGTTCAATTAAAATATCTTATTGAGGAAAATCTTTCATTGGGACCAGGTAGCAAAGTCATCATTACAAGTAGAGATAAGCATGTTCTTATTAGTGGAGGAGCTCATGAAGTACATGAGGTGAAAGAATTAAATAAGGAAGAATCGCTTCAACTTTTCTGCCGACATGCTTTCAAGCAAGGCCATCCCAAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATCAAAAGTTTTGGGTTCATATTTGAACTCCAGAAATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAATGGAGAAAAGAAAGAAGATATTATGCAGGTGCTCGATGCTTGTGATGATGACCTCTACGTGGACATTGGAATAGATAGGCTTCTAGATAAAGCACTCATAACTATTTCAAGTCACAGTAGAGTAGAAATTCATGATATGCTACAAGAAATGGCCGAAGAAATAGTTCGTGAGGAATCTCGAGAGCATCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAATCCAAGATGTATCGGAAAATAACAAGGGAACTGATACAATTGAAGGCATTGCATTGAACCCAGATGAGTTAGAAAGCAACATACACTTGAGTGCTGACGCTTTCAAAAAAATGAGTAATTTAAGATTTCTCAAGATTGGTTTTGGTTTAGACAAACTTGTTGAAATTCAAATGCCTTGGAGCAAAGTTGTAAAACTATGGGATGGTGTGCAGAATCTTATGAATTTGAAGATGATAAATCTTTCCTCTTCCTACGAGTTAGAGGAATTGCCTGATTTCTCCATGGCACAAGATCTTGAAATAATGGATCTCAGTTATTGTAAAGGATTATGTCGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTTTGAATCTAGCGGGGTGCATCGAACTAAAGAATCCTCACGGTGATAACCATTTGAAATCTCTCAAGGAGCTCAAGTTGATGTTGTGCCCTGCTCTCAAGGAATTTTTGTTGTCAGCAGAAGAAATGAGAAGTTTACATGTGAAAAGTAAAGGTATCAAAAAGCCAATCTTGCCAGTTGACCGGTTATTAAGCTTTCCATTTGGACGGTTCAATAATCTTGAAGAGCTATGTCTCAATAGACTTCTCAGGAGCTTTCAAGTAAATGAGCTAGGTAGCTTGACATCTCTTAAAGTATTCTCTCTTGATGGTTTTAAAGGCAAACTAGACAAATCAAAATTAGTCATTCTATTTGATGCCTTGCCTTCTTTAGAAGAACTATATTTGACGTACTGCAGGATTCGTCAGATCCCTGACAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACAAGGAAGTAGCGTTATGGGTTTGCCAGATAGCATCAAGCATCTTTCAGAGCTCAGAGAAATTGATTTGGGTAAATGCAAGATGCTTAGGTCCTTACCAGAACTTCCACCTTCCCTTGCTTATTGTTATCTCAACGAATGCCAATCATTGGAGACCTTCGGTTTCTCATTGATGCGAGCAATACATAACTCTAGTGAGCTTAGATTTTGTTATCCCGGAAGCACAATCCCAGGGGGCTTCAAATTTTCTCAGACCACTAAGGGCTCCATTAGTATTAAGCTTGCACCAGGTTCTTCTCACCATTTGTTGGGTTTCGCTTCTTGTTGTATTATTTCCCCATCGAGGCTCAAATCTTTGCCACTAGTTGGTAGAAAATTCCACTATGAAGATGAAGAGATCTATTACAAGGTTGACGACAAACTCTCTCGCCACGAGTTTCGGAGTACAAATCATGTTTTGCTATGGTATGATCCAGTGGATCGCATGTTGAAGGAAAACCAAAGAAGGCGATTTGATGAGGGCGCCAATTGCGAGTTTGCATGTGAATTCTTCCACAGAAGTTTCGTCGGTCCTCATGTGGCAAAATATAATAACAGGATAAAAGGGTGCGGAATTTGGCCAATACATGCATCAGAATTGCAGGGGAAAATGGAATTAAGGCTGGAGATGGATGCTGTTACAGACAGTGCCAGCCAGCACCCTAATGCTGAAGTGTCCCAACATCAGCCAGCACGTGATTCTGTTAGGAGAAGCACTTGTGTGCGCCAGAGGATAGGGAACTTGACCACTCTGCCTTACTCTGAGAGCCAAGAGATGCCGAAATGA 3018 0.3953 MATFTTSPSVRQEKYDVFVSFRGPDTRRRFVSHLRKQFRQKGIEVYVDETAERGDTISPALSEAIERSRIALVIFSETMPLQDPSHVRHQRGSYEDAFVQHHNCKVDSRKLQDWRSVLKETADIFGYHNSSDFQNESDLIDAIIEDVSKKLEGKDTMEPKHLIGIEKDLTAIELFIKDESHEVRVLGIWGKGGIGKTSLARAAFDNFYHQFDRSCFAENVREKSKTIGTNCLLEKILSVLLDEEKLTMVGMPNVQRRLRRTRVLLVLDDVDTLVQLKYLIEENLSLGPGSKVIITSRDKHVLISGGAHEVHEVKELNKEESLQLFCRHAFKQGHPKQGYEKLSMQVIEYAKGLPLASKVLGSYLNSRNTKAWESALKKLRNGEKKEDIMQVLDACDDDLYVDIGIDRLLDKALITISSHSRVEIHDMLQEMAEEIVREESREHPESRSRLNDAKEIQDVSENNKGTDTIEGIALNPDELESNIHLSADAFKKMSNLRFLKIGFGLDKLVEIQMPWSKVVKLWDGVQNLMNLKMINLSSSYELEELPDFSMAQDLEIMDLSYCKGLCRIHPSILSLPKLVSLNLAGCIELKNPHGDNHLKSLKELKLMLCPALKEFLLSAEEMRSLHVKSKGIKKPILPVDRLLSFPFGRFNNLEELCLNRLLRSFQVNELGSLTSLKVFSLDGFKGKLDKSKLVILFDALPSLEELYLTYCRIRQIPDNISAMSLLKILSLQGSSVMGLPDSIKHLSELREIDLGKCKMLRSLPELPPSLAYCYLNECQSLETFGFSLMRAIHNSSELRFCYPGSTIPGGFKFSQTTKGSISIKLAPGSSHHLLGFASCCIISPSRLKSLPLVGRKFHYEDEEIYYKVDDKLSRHEFRSTNHVLLWYDPVDRMLKENQRRRFDEGANCEFACEFFHRSFVGPHVAKYNNRIKGCGIWPIHASELQGKMELRLEMDAVTDSASQHPNAEVSQHQPARDSVRRSTCVRQRIGNLTTLPYSESQEMPK 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5604g00016 1005 PRINTS Disease resistance protein signature 744 760 - -
Pral5604g00016 1005 PRINTS Disease resistance protein signature 185 200 - -
Pral5604g00016 1005 PRINTS Disease resistance protein signature 257 271 - -
Pral5604g00016 1005 PRINTS Disease resistance protein signature 350 364 - -
Pral5604g00016 1005 MobiDBLite consensus disorder prediction 959 983 - -
Pral5604g00016 1005 Gene3D - 315 399 IPR042197 -
Pral5604g00016 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 618 IPR044974 GO:0006952
Pral5604g00016 1005 Pfam TIR domain 14 79 IPR000157 GO:0007165
Pral5604g00016 1005 Pfam TIR domain 83 159 IPR000157 GO:0007165
Pral5604g00016 1005 Gene3D - 9 80 IPR035897 -
Pral5604g00016 1005 Gene3D - 152 310 IPR027417 -
Pral5604g00016 1005 ProSiteProfiles TIR domain profile. 13 151 IPR000157 GO:0007165
Pral5604g00016 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 399 IPR027417 -
Pral5604g00016 1005 SUPERFAMILY L domain-like 424 785 - -
Pral5604g00016 1005 Gene3D Ribonuclease Inhibitor 423 634 IPR032675 -
Pral5604g00016 1005 Gene3D Ribonuclease Inhibitor 638 809 IPR032675 -
Pral5604g00016 1005 Pfam NB-ARC domain 178 385 IPR002182 GO:0043531
Pral5604g00016 1005 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 127 IPR035897 -
Pral5604g00016 1005 Gene3D - 81 151 IPR035897 -
Pral5604g00016 1005 SMART till_3 14 124 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5604g00016 Pral-Chr5604 112835 116539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5604g00016 15 752 WRKY Transcription Factor Family AT4G12020 27.392 3.03e-61 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5604g00016 - - pcin:129311144 880.552