Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5604g00015 ATGGCAACTTTTACGACTTCTCCCAGCGTTCGGCAGGAAAAATATGATGTTTTTGTCAGTTTTAGAGGTCCAGACACCAGACGTAGATTTGTTGGCCATTTGAGAAAGCAGTTTCGACAAAAGGGCATAGAGGTTTATGTTGATGAGACGGCAGAGAGAGGAGATACAATATCACCTGCACTTTCAGAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCTGAAAACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGTGAAAATCATGCAATGCAGGCAAGACCATAGTCAGATTGTAATTCCAGTTTTCTATGATATAGACCCATCAAATGTTAGGCGTCAAAAAGGATCGTATGAAGGTGCATTTGTTCAGCATCGTAACTGCAGAGTTGATTCAAGGAAGTTGCAAGATTGGAGATCGGTCTTAAAAGAAACTGCAGACATATTTGGTTATCATAATTCCTCAAATTTTCGGGATGAAGCTGACCTTATTGATGAAATAATCAAAGATGTATGCAAAAAGCTAGAAGGTAAAGGTAAAGACACAGTGGAGCCAAAGGACCATATTGGAATTGAGAAAAATTTGACTCCTATTGAATTATTTATGGAAGATGAATCACATGAAGTTAGAGTTTTAGGAATTTGGGGTAAAGGAGGAATAGGCAAAACCACCTTAGCTCATGCCACATTTGATAACTTTTACCACCAATTTGATAGGTCTTACTTTGCTGAAAATCCTAATATTCAAAGGAGGCTACGTAGAACAAGAGTTCTTCTAGTTCTTGATGATGTAGACACCTCCAGTCAATTACAATATCTTATTGATGAAAATCTTTCATTGGGACCAAGTAGCAAAGTCATCATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGAGGAGCTCATGAAGTACATGAGGTGAAAGAATTAGGCAAGGAAGAATCGCTTCAACTTTTTTGCTGGCATGCTTTCAAGCAAGGCCATCCCGAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGTTCATATTTGAACTCTAGAAATACAGAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAAGAATCCAAATAGGAAAATTCATGATGCATTAAGGGTGAGCTATGATGGACTTGATACCCTAGAAAAGGAGATATTTTTAAATATTGCATTCTTCCTCGGGGGAGAAAAGAAAGAAGATATTATGAGGGTGCTAGACGCTTGTGATGATGACCTCTACGTGGACATTGGAATAGATACGCTTCTGGATAAAGCACTCATAACCATTTCAAGTCACAATGGAGTAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAAGAATCTAGAGAGCACCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAGTTCAAGATATACTGGAAAATAACAAGGGAACTAATATAATTGAAGGCATCGCATTGAACACATGTGAGTTAAAAAGCAACATACGCCTGAGTGCTGACGGCTTTAGTAGAATGAGTAATTTAAAATTTCTCAAGATTAATTCTTATTTTCGAGACAAATATCAAGTGCTTTGTCCCTTTGGTCTAGAGTCACTTCCTGATAAACTAAGATATTTTTGTTGGGAAAGTTATCCATTGGAGACTCTACCGCTTGGTTTTTGTGCAAAGAATCTTGTTGAAATCCAACTGCCTTCTAGCAAACTTGTAAAACTATGGGATGGTGCGCAGGATCTTATGAATTTGAAGAAAATAAATCTTGCCTGCTCAAAGTTAAAGGAGTTGCCTGATTTCTCCACGGCACAAAATCTTGAAATAATGAGCCTCAGATTTTGTGTAAATTTATGCAGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTTTGGATCTAGAGGGGTGCATCACACTAAAGAATCTTCATGGGAATAACCATTTGAAATCTCTCAAGAAACTCAACCTAAATTATTGCTCTGCTCTCAAGGAATTTTTGTTGTCATCAGAAGAAATGAGAAGTTTAAGTTTATTTGGTACTGGTATCGAAACCTTGAACTTGCCATTTGGACGGTACAATAAACTTGAAGAGCTATATCTCGGTGGGGCTCTCAGGAACTTTCAAGTAAATGAGCTAAGTAGCTTGACATCTCTTAAAATATTCTCTCTTGATCGTTTTGAAGGAAGAATAGTCAAATCAAAATTATTCATTCTGTTTGATGCGTGGTGTTCGTTAGAAGAATTGAGGTTGACAGACTGTGAGGTTTCTGAGATCCCTGATAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACGAGGAAGCAGCGTTAAGAGTTTGCCAGATAGCATCAAGCATCTTTCAGAGCTCAGAGAAATTGATTTGGGTAATTGCAAGAGCCTTAGGTCCTTACCAGAACTTCCATCCTCCCTTACTCATTGTCATCTCCACGAATGCCAATCACTGAAGACCTTCAGTTTCCCACTAATGCGAGCAATACATAACTCTAGTGAGGTTAGAGTTTGTTATCTCGGAAGCACAATCCCAGAGGGCTTCAAATATTCCCAGACCGCTAAGAGCTCTATTAGTATTGAGCTTGCACCAGCTTCTTCTGACCATTTATTGGGTTTCGCTTCTTGTTGCATTGTTTCCCCATCGACGCTGCTACGAGTTGACAGAAAATTCCACTTTGAAGATGAAAAGATCTATTACGAGAGTGACAAGATCATATTCCTTATGAATCCGAGTACAGATCATGTTTTTTTATGGTATGATCCAGTGGATCGCATGTTGAAGGAAAACCAAAGAAGGCGATTTGATGAGGGCGGCACTTACAAGTTTGCATGTGAATTCTTCTACGGAGTTTGCTCCGATCGTTCTGCGGATGAATTTAATGACGGGATAAAAAGGTGTGGAATTTGGCCAATATATGCATCAGAATTACAGGAAAAAGTGGAATTCAGGCTAGAGACAGATGCTGTTATAGGCAGTACCAGCCAGCACCCTAATGTTGAAGTGTCCCAACATCAGCCGGCACGTTATTTCGTTAGGAGAAGCGCTCGTGTGCGCCAGAGGACAGGGAACTTGACCATGATGCCGTACTCTTTGAGAACGAGGAGAGGCCGAAATGAGCGCACGGCCCCAAAGGATAACAAAAGAATCACTCGATGA 3228 0.3925 MATFTTSPSVRQEKYDVFVSFRGPDTRRRFVGHLRKQFRQKGIEVYVDETAERGDTISPALSEAIERSRIALVIFSENYASSRWCLEELVKIMQCRQDHSQIVIPVFYDIDPSNVRRQKGSYEGAFVQHRNCRVDSRKLQDWRSVLKETADIFGYHNSSNFRDEADLIDEIIKDVCKKLEGKGKDTVEPKDHIGIEKNLTPIELFMEDESHEVRVLGIWGKGGIGKTTLAHATFDNFYHQFDRSYFAENPNIQRRLRRTRVLLVLDDVDTSSQLQYLIDENLSLGPSSKVIITSRDRHVLISGGAHEVHEVKELGKEESLQLFCWHAFKQGHPEQGYEKLSMQVIEYAKGLPLALKVLGSYLNSRNTEAWESALKKLRKNPNRKIHDALRVSYDGLDTLEKEIFLNIAFFLGGEKKEDIMRVLDACDDDLYVDIGIDTLLDKALITISSHNGVEIHDMLQEMAEEIVREESREHPESRSRLNDAKEVQDILENNKGTNIIEGIALNTCELKSNIRLSADGFSRMSNLKFLKINSYFRDKYQVLCPFGLESLPDKLRYFCWESYPLETLPLGFCAKNLVEIQLPSSKLVKLWDGAQDLMNLKKINLACSKLKELPDFSTAQNLEIMSLRFCVNLCSIHPSILSLPKLVSLDLEGCITLKNLHGNNHLKSLKKLNLNYCSALKEFLLSSEEMRSLSLFGTGIETLNLPFGRYNKLEELYLGGALRNFQVNELSSLTSLKIFSLDRFEGRIVKSKLFILFDAWCSLEELRLTDCEVSEIPDNISAMSLLKILSLRGSSVKSLPDSIKHLSELREIDLGNCKSLRSLPELPSSLTHCHLHECQSLKTFSFPLMRAIHNSSEVRVCYLGSTIPEGFKYSQTAKSSISIELAPASSDHLLGFASCCIVSPSTLLRVDRKFHFEDEKIYYESDKIIFLMNPSTDHVFLWYDPVDRMLKENQRRRFDEGGTYKFACEFFYGVCSDRSADEFNDGIKRCGIWPIYASELQEKVEFRLETDAVIGSTSQHPNVEVSQHQPARYFVRRSARVRQRTGNLTMMPYSLRTRRGRNERTAPKDNKRITR 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5604g00015 1075 Pfam NB-ARC domain 251 386 IPR002182 GO:0043531
Pral5604g00015 1075 Pfam Leucine Rich Repeat 576 595 IPR011713 -
Pral5604g00015 1075 Gene3D - 12 184 IPR035897 -
Pral5604g00015 1075 Pfam TIR domain 14 182 IPR000157 GO:0007165
Pral5604g00015 1075 SUPERFAMILY L domain-like 455 843 - -
Pral5604g00015 1075 Gene3D Ribonuclease Inhibitor 445 685 IPR032675 -
Pral5604g00015 1075 Gene3D Ribonuclease Inhibitor 686 878 IPR032675 -
Pral5604g00015 1075 Gene3D - 185 250 IPR027417 -
Pral5604g00015 1075 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Pral5604g00015 1075 MobiDBLite consensus disorder prediction 1056 1075 - -
Pral5604g00015 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 406 IPR027417 -
Pral5604g00015 1075 Gene3D - 313 397 IPR042197 -
Pral5604g00015 1075 FunFam Disease resistance protein (TIR-NBS-LRR class) 315 397 - -
Pral5604g00015 1075 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
Pral5604g00015 1075 Gene3D - 251 308 IPR027417 -
Pral5604g00015 1075 SMART till_3 14 152 IPR000157 GO:0007165
Pral5604g00015 1075 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Pral5604g00015 1075 Pfam C-JID domain 864 1000 IPR045344 -
Pral5604g00015 1075 PRINTS Disease resistance protein signature 348 362 - -
Pral5604g00015 1075 PRINTS Disease resistance protein signature 215 230 - -
Pral5604g00015 1075 PRINTS Disease resistance protein signature 804 820 - -
Pral5604g00015 1075 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 686 IPR044974 GO:0006952
Pral5604g00015 1075 MobiDBLite consensus disorder prediction 1057 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5604g00015 Pral-Chr5604 99428 103156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5604g00015 15 812 WRKY Transcription Factor Family AT4G12020 30.733 4.60e-90 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5604g00015 - - pcin:129311144 1030.01