Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5604g00014 ATGGACTCTTCCTTTCTCATGGGTAGTACAATTCCAGAGCCTCGTGATGATATGGAATTTGAATCACATGAAGCTGCCTATGCATTTTATAAGGAATATGCTAAGTCTGTGGGGTTTGGCACTGCCAAGTTGAGCAGTCGTCGGTCTAGAGCATCAAAAGAATTTATTGATGCCAAGTTTTCATGTATAAGATATGGAAATAAACAGCAATCTGATGATGCTATCAATCCACGCCCATCTCCAAAAATTGGTTGTAAAGCAAGTATGCATGTGAAAAGAAAACAAGATGGCAAGTGGTATGTCTATAGCTTTGTGAAAGAGCATAATCATGAGCTTTTACCTGCTCAGGCTCATTTTTTCAGGAGTCATAGGAGTAGTGATCCGCTTGGTAATGATGTCCGGATGCGAAGGCGGAAGAATTTAACTGCAGTTTCCAAATTATTTAATGCATATCAAAGTGTCGATTGTTTAGAGCACTTTTTGAGAACTCTACAGGATAAGGGACGGAGTTTGGTTCTAGAAACTGGGCAAGCCCAATTGCTTCTTGAACTCTTTATGCACATGCAGGAAGAAAATCCAAAATTCTTCTACGCCGTTGATTTGAATGAAGAGCATAGACTGAGAAATGTGTTCTGGGTTGATGCCAAAGGTGTGGAAGATTATACTTACTTTGGTGATGTGGTTTCTTTTGACACAACATATTTCACCAGCAAGTATAAAATACCGTTGGTGCTTTTTATTGGAGTAAACCATCATATTCAACCCACATTGCTTGGTTGTGCATTGATTGCTGATGAAACCAATTACACTTTTGCTTGGTTATTGCAAACATGGTTAATTGCAATGGGGGGACGAGCTCCACAAGTGATTCTTACTGATCAAAATGAGGCCATGAAAACAGCTGTTGCTGCAGTTCTTCCAGGTACACGTCATTGTTTTTGTTTGTGGCATATTTTGGAAAAGATACCGAGGCAGCTTGAATTTTTAGGTGCATGGCATCATAATTTTATGGAAAAATTAAACAAATGTATATATAAATCATGGACAGAGGAACAATTTGAAAGGAGATGGTGGAAGTTGGTTGATAAGTTTAATTTGAGAGATGTTGAATGGGTCCAATCCTTGTACAATGATCGGACGCGTTGGGTGCCAACTTTTATGAAAGAGATCTCTTTTGTTGGACTGTCCGCTAGTTCTCGTGCAGAAAGTTTGAGTGCTTTGTTTGACAACTATGTCCAGTGTGATACTTCATTGGGAGAATTTATAGAGCGGTACAGAATGGTTCTTGAAGAAAGGTATGAAGAAGAAGCCAAAGCAAATTTTGATGCCTGGCATGAGACACCTGAATTAAAGTCTCCTTCTCCTTTCGAGAAACAAATGTTATTTGTTTACACGCACGAGATTTTTAAGAAGTTCCAAGTTGAAGTTCTGGGCGCAGCTGCTTGCCATCTTAAAATGGAAAATGATGGTGTCACTGCAACATATACTGTGAAGGACTTTGAAGATGATCAAAGTTATGTGGTAGAGTGGAACAAATCTAATTCAGATATATGTTGCTCATGCCGCTCATTTGAATATAAAGGTTACGTTTGTAGACATGCTATTGTCGTTCTACAAATGTCAGGGGTTTTCAGTATACCACCCAAGTATGTGTTGCAACGATTGACAAATGCTGCTAAGAGCAAGCATCCTATCAGTGAAAGATTAGAGGAGGTGCAATCTAAGGTCCGACGGCTCAATGATTTATGCAGGCGAGCCATAATATTTGGTGAAGAAGGTTCTTTGTCCCAAGAAAGTTACTACATTGCTTTAGGTGCCATAAAGGAAGCCTTAAAGCAATGCACAAACATGAACTCTGTTGAGAATGATGCGAGGCTTGATGCCCTAGTTACTCAAGTTTGCAATATTGAAGAGGAGCATCAATCTGGTAATGCTTATAACAAGAAAGTTCCTGGGATGGCTACTGGTAATAAGGCTGCAAGGACTGGTGGGGCTGCTAGGGAAGTAGGAAGTACAGAAAATACCGAAGGAAATAAAGGGAAGGTATCTCAACTAGAAGCAGTGGGCAGCCAAGGTGGTTTTCACCAAATGGAATTGACAGATATGAGGCAGCATAATGTCATGCCTATGCAGTTTCACAGTATGGTGCCTCTGTTCCATACTGCATCAACACAGTATCACAACGCAGCTTCAACTCACTTGCATGAGAACTGCCTTCCTCGTTAG 2226 0.4025 MDSSFLMGSTIPEPRDDMEFESHEAAYAFYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRKQDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLGNDVRMRRRKNLTAVSKLFNAYQSVDCLEHFLRTLQDKGRSLVLETGQAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGVEDYTYFGDVVSFDTTYFTSKYKIPLVLFIGVNHHIQPTLLGCALIADETNYTFAWLLQTWLIAMGGRAPQVILTDQNEAMKTAVAAVLPGTRHCFCLWHILEKIPRQLEFLGAWHHNFMEKLNKCIYKSWTEEQFERRWWKLVDKFNLRDVEWVQSLYNDRTRWVPTFMKEISFVGLSASSRAESLSALFDNYVQCDTSLGEFIERYRMVLEERYEEEAKANFDAWHETPELKSPSPFEKQMLFVYTHEIFKKFQVEVLGAAACHLKMENDGVTATYTVKDFEDDQSYVVEWNKSNSDICCSCRSFEYKGYVCRHAIVVLQMSGVFSIPPKYVLQRLTNAAKSKHPISERLEEVQSKVRRLNDLCRRAIIFGEEGSLSQESYYIALGAIKEALKQCTNMNSVENDARLDALVTQVCNIEEEHQSGNAYNKKVPGMATGNKAARTGGAAREVGSTENTEGNKGKVSQLEAVGSQGGFHQMELTDMRQHNVMPMQFHSMVPLFHTASTQYHNAASTHLHENCLPR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5604g00014 741 MobiDBLite consensus disorder prediction 657 681 - -
Pral5604g00014 741 Pfam SWIM zinc finger 507 540 IPR007527 GO:0008270
Pral5604g00014 741 SMART 26again6 517 544 IPR006564 GO:0008270
Pral5604g00014 741 Pfam MULE transposase domain 227 320 IPR018289 -
Pral5604g00014 741 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Pral5604g00014 741 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
Pral5604g00014 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 616 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5604g00014 Pral-Chr5604 74380 79487 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral5604g00014 MULE 7.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5604g00014 - - gmx:100805273 1219.14