Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5603g00005 ATGGCTTCGAGTGAGGTGGAAGGATTATCGCTTCCTACAGACGATTACGAGACCCTGCTTTCCACCACTGACGTTGAGCTGCTCAAGAGAGCATGGCGCAACGAGAAGGCAGCTCCTGAGATTCTTCGTTTTGAGACCGATTTAATTGGCCGCATTAGAGAACAGATCCAATTAATGGAAGAAACAGTGGAGGAGAAATCAGCTGCTGGCATCGATCCCCTTTCAATATCTCTCTATCAGATGGACTTGGATAGAGCCCAGTTTTTACTTAGATCATACCTCCGAGTTCGCATTCAGAAGATTGAAAAGTTCGTGTTCCACATTGCAAAAACTGATGAACTGTGGAACAAGCTATCTAAAGAAGAGAAAAATTTCGCTAGAAGGTGTACTGAAGATCTAAAACAGCACTTGGAGGATAGTGTTCTATCAAAGCTGCCAGAAAATTATCAATCTTTCCAGAAGCAATCTGTAATAAGCGAAGAGGATGACATGATTCCAGAAGCACAACTAGACACATTTGTTGTATGCAGAAGCAAAGAATATCTCACAGGCATCCAGCTTGAGGATGGACCAGTGGATGACAGGTCGATGCTGTTTGAGATGGAGCCAGGTGTGCTCTACTTCATATGTTACAAGTCTATAAAGGCACTTGTGGAGAGCGGCAAAATTGATCTTCTCTGA 681 0.4347 MASSEVEGLSLPTDDYETLLSTTDVELLKRAWRNEKAAPEILRFETDLIGRIREQIQLMEETVEEKSAAGIDPLSISLYQMDLDRAQFLLRSYLRVRIQKIEKFVFHIAKTDELWNKLSKEEKNFARRCTEDLKQHLEDSVLSKLPENYQSFQKQSVISEEDDMIPEAQLDTFVVCRSKEYLTGIQLEDGPVDDRSMLFEMEPGVLYFICYKSIKALVESGKIDLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5603g00005 226 Pfam GINS complex protein 32 123 IPR021151 -
Pral5603g00005 226 PIRSF GINS_Sld5 1 226 IPR008591 GO:0006261
Pral5603g00005 226 Gene3D - 12 216 - -
Pral5603g00005 226 FunFam DNA replication complex GINS protein SLD5 11 216 - -
Pral5603g00005 226 SUPERFAMILY GINS helical bundle-like 21 156 IPR036224 -
Pral5603g00005 226 Pfam DNA replication complex GINS protein SLD5 C-terminus 169 226 IPR031633 -
Pral5603g00005 226 CDD GINS_B_Sld5 170 226 IPR031633 -
Pral5603g00005 226 SUPERFAMILY PriA/YqbF domain 170 226 - -
Pral5603g00005 226 PANTHER SLD5 PROTEIN 12 226 IPR008591 GO:0006261
Pral5603g00005 226 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5603g00005 Pral-Chr5603 19754 22882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5603g00005 1 173 Core DNA Replication Machinery Family AT5G49010 62.428 6.97e-70 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5603g00005 K10735 - qsa:O6P43_008399 385.956