Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5603g00004 ATGGCTTCGAGTGAGGTGGAAGGATTATCGCTTCCTACAGACGATTACGAGACCCTGCTTTCCACCACTGACGTTGAGCTGCTCAAGAGAGCATGGCGCAACGAGAAGGCAGCTCCTGAGATTCTTCGTTTTGAGACCGATTTAATTGGCCGCATTAGAGAACAGATCCAATTAATGGAAGAAACAGTGGAGGAGAAATCAGCTGCTGGCATCGATCCCCTTTCAATATCTCTCTATCAGATGGACTTGGATAGAGCCCAGTTTTTACTTAGATCATACCTCCGAGTTCGCATTCAGAAGATTGAAAAGTTCGTGTTCCACATTGCAAAAACTGATGAACTGTGGAACAAGCTATCTAAAGAAGAGAAAAATTTCGCTAGAAGGTGTACTGAAGATCTAAAACAGCACTTGGAGGATAGTGTTCTATCAAAGCTGCCAGAAAATTATCAATCTTTCCAGAAGCAATCTGTAATAAGCGAAGAGGATGACATGATCATGAGGAGAATTTCTTGGGATATATTTGCTTTGCCACAGAAGTCTGTATATCGGATATGGTGGAATTGGATTCTTGCCGTTGAGAATAATATTCATATCCCAGAAGCAAAGAATATCTCACAGGCATCCAGCTTGAGGATGGACCAGTGGATGACAGGTCGATGCTGTTTGAGATGGAGCCAGGTGTGCTCTACTTCATATGTTACAAGTCTATAA 711 0.4262 MASSEVEGLSLPTDDYETLLSTTDVELLKRAWRNEKAAPEILRFETDLIGRIREQIQLMEETVEEKSAAGIDPLSISLYQMDLDRAQFLLRSYLRVRIQKIEKFVFHIAKTDELWNKLSKEEKNFARRCTEDLKQHLEDSVLSKLPENYQSFQKQSVISEEDDMIMRRISWDIFALPQKSVYRIWWNWILAVENNIHIPEAKNISQASSLRMDQWMTGRCCLRWSQVCSTSYVTSL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5603g00004 236 Gene3D - 12 173 - -
Pral5603g00004 236 PANTHER SLD5 PROTEIN 12 159 IPR008591 GO:0006261
Pral5603g00004 236 SUPERFAMILY GINS helical bundle-like 21 156 IPR036224 -
Pral5603g00004 236 Pfam GINS complex protein 34 123 IPR021151 -
Pral5603g00004 236 CDD GINS_A_Sld5 24 142 IPR038749 -
Pral5603g00004 236 FunFam DNA replication complex GINS protein SLD5 11 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5603g00004 Pral-Chr5603 19754 22882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5603g00004 1 164 Core DNA Replication Machinery Family AT5G49010 64.634 3.43e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5603g00004 K10735 - qsa:O6P43_008399 271.937