Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5603g00002 ATGAACGTTCGGAATAACAACAATAATAATACCAGTAACCACCATAACAACAACAATAACCAGGCTTGTGCTGCTTGTAAGTACCAACGTAAGAAGTGTGCTCCTGACTGTATTCTCGCTCCTTATTTCCCTCACGATCGACAACGTCAATTCCTCAACGCCCATAAGTTGTTCGGTGTCCGGAACATCACCAGAATCATCGAAAACCTCGACCCTCACAGTCGCAACGAAGCCATGCGAAGCATCATTTATCAGTCCGACATGCGAGCCGCTGACCCCGTCGGAGGTTGTTACAGGCACATTCAAGAACTTGTCGCCCAGATTCAATACCATGAGGCTGAACTCGAGCTTATTCTTCAACAACTTGCTGTATTTCGTGCCCAGGCTCGCCATCATCATCATCTTCATCGGCATTCTCATCCTCAAGAGATTGTTGATACTACTCCAGATCATTTGTATAGCCCTAATATTGCAGCAGTATTGCCATCACCAGTTTCTCATTACCAGTATATTCAACAGCAACAACAAGAGCCGACGATGAATATGATGGTAGTTAATAAGGATCATCAACATCATCAGAGTAATAATAATAATTTGCAGGACGATGTTAATTATTGGGTTTCGCAGGATTCAATGTCTTTGTCGTCTTTGTCGTTGCAGAACAAGAATGGTGGGGATGAACAAAGTGGTTATGTGGGTGATGAATTGTATAATGATCATAAGTCGTCGTCTTCTTCGTCTATGCTTGATATTCATCGTGATGACAGGTTTTGA 774 0.4276 MNVRNNNNNNTSNHHNNNNNQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITRIIENLDPHSRNEAMRSIIYQSDMRAADPVGGCYRHIQELVAQIQYHEAELELILQQLAVFRAQARHHHHLHRHSHPQEIVDTTPDHLYSPNIAAVLPSPVSHYQYIQQQQQEPTMNMMVVNKDHQHHQSNNNNLQDDVNYWVSQDSMSLSSLSLQNKNGGDEQSGYVGDELYNDHKSSSSSSMLDIHRDDRF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5603g00002 257 Coils Coil 101 121 - -
Pral5603g00002 257 Pfam Lateral organ boundaries (LOB) domain 22 117 IPR004883 -
Pral5603g00002 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 19 192 - -
Pral5603g00002 257 ProSiteProfiles LOB domain profile. 21 122 IPR004883 -
Pral5603g00002 257 MobiDBLite consensus disorder prediction 217 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5603g00002 Pral-Chr5603 9866 10639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5603g00002 21 148 AS2 family AT3G13850 63.281 5.40e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5603g00002 LOB 1e-35 No_clan