Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5603g00001 ATGAACCTCTCTCACAACAACAACAACAACGTTAACCCTAACAACAACAATAATCAGGCTTGTGCTGCTTGTAAATATCGACGTAGAAAGTGTGCTCCTGATTGCATTCTCGCACCTTATTTCCCTCACGATCGCCAACGTCAATTCCTCAACGCCCATAAATTGTTCGGCGTCCGAAACATCACCAAAATCATCGAAAACCTCAACCCTCGCGACAAAGACAACGCCATGCGAACCATCATTTATCAATCCGACATGCGAGCTAATGATCCTGTCGGAGGTTGTTGCAGGTACCTCCAGGAGCTTCAAGCTCAGGTCCAATACCATCAAGCTGAACTCGATCTTGTTCTTCAACACCTCGCTGTTTTTCGATCCCAAGCTCATCATCATCAGGAAGCTATCGATATTAATAACGATGCCGATCATTTGAATCTGTGCAACCCTAATAATATTAGTCATTATCAGTTGGCTCAACAGGATCCGTATCTGATGGTTCAGGAACAACATCATCAAAACAATAATGGTGTTGCTTTGCAGCATCAGGACGATGTTAATTCTTGGGCCATGCAGGAATCCATAACCTTGTCGTTTCACGACAAGAACGGCGACGATGAGAGTGGTGGCGGTTATGTCGGCGATGAATGTACAACAATGATCAGAAACCTTCGTCGTGTATGCTTGACAACATTAATTGTGAGGAAAGGAACGAGATTGGTTTTGAACCTGAGGAATTAG 735 0.4408 MNLSHNNNNNVNPNNNNNQACAACKYRRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITKIIENLNPRDKDNAMRTIIYQSDMRANDPVGGCCRYLQELQAQVQYHQAELDLVLQHLAVFRSQAHHHQEAIDINNDADHLNLCNPNNISHYQLAQQDPYLMVQEQHHQNNNGVALQHQDDVNSWAMQESITLSFHDKNGDDESGGGYVGDECTTMIRNLRRVCLTTLIVRKGTRLVLNLRN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5603g00001 244 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Pral5603g00001 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 166 - -
Pral5603g00001 244 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5603g00001 Pral-Chr5603 1915 2649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5603g00001 19 133 AS2 family AT3G13850 69.231 6.45e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5603g00001 LOB 2.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5603g00001 - - pcin:129289336 245.743