Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5602g00009 ATGAACCTCTCTCACAACAACAACAACAACGTTAACCCTAACAACAACAATAATCAGGCTTGTGCTGCTTGTAAATATCGACGTAGAAAGTGTGCTCCTGATTGCATTCTCGCACCTTATTTCCCTCACGATCGCCAACGTCAATTCCTCAACGCCCATAAATTGTTCGGCGTCCGAAACATCACCAAAATCATCGAAAACCTCAACCCTCGCGACAAAGACAACGCCATGCGAACCATCATTTATCAATCCGACATGCGAGCTAATGATCCTGTCGGAGGTTGTTGCAGGTACCTCCAGGAGCTTCAAGCTCAGGTCCAATACCATCAAGCTGAACTCGATCTTGTTCTTCAACACCTCGCTGTTTTTCGATCCCAAGCTCATCATCATCAGGAAGCTATCGATATTAATAACGATGCCGATCATTTGAATCTGTGCAACCCTAATAATATTAGTCATTATCAGTTGGCTCAACAGGATCCGTATCTGATGGTTCAGGAACAACATCATCAAAACAATAATGGTGTTGCTTTGCAGCATCAGGACGATGTTAATTCTTGGGCCATGCAGGAATCCATAACCTTGTCGTTTCACGACAAGAACGGCGACGATGAGAGTGGTGGCGGTTATGTCGGCGATGAATGGTACAACAATGATCAGAAACCTTCGTCGTGTATGCTTGACAACATTAATTGTGAGGAAAGGAACGAGATTGGTTTTGAACCTGAGGAATTAGTGGAACGGAGTGATGAGGCGATCTTGTTCAAGATAGAAAATGCAGATGTAAATGAAGAGGTTAATTGCATTCAACAAGTTCAAGATCATGATCTAAAAGGTGCTGCAACCTTGTTCACCCTCACAAATTGCACTAGCTGA 876 0.4349 MNLSHNNNNNVNPNNNNNQACAACKYRRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITKIIENLNPRDKDNAMRTIIYQSDMRANDPVGGCCRYLQELQAQVQYHQAELDLVLQHLAVFRSQAHHHQEAIDINNDADHLNLCNPNNISHYQLAQQDPYLMVQEQHHQNNNGVALQHQDDVNSWAMQESITLSFHDKNGDDESGGGYVGDEWYNNDQKPSSCMLDNINCEERNEIGFEPEELVERSDEAILFKIENADVNEEVNCIQQVQDHDLKGAATLFTLTNCTS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5602g00009 291 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 166 - -
Pral5602g00009 291 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
Pral5602g00009 291 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5602g00009 Pral-Chr5602 60301 61418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5602g00009 19 133 AS2 family AT3G13850 69.231 1.85e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5602g00009 LOB 4e-35 No_clan