Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5602g00007 ATGGTATCTCAGTTGGCTTGTTTCCTTTGTCCATTAGTGCCCTCTCCTTCACCGGGAACTACACCTCGGGGTTCGCCATTGAGGAAGACGAAGACTCCACCAAGAGGACCTGTCTTGGGTCTGCCACCTCCACCTCCCAATAAGGACTGTATATGGGTGACTTGCTCAGAGCCCTTCACATATGCACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAGCTTCGCCTTGGTATTTCAATATACAAGTTCTTTCCTTTGGTCTCGAAGCTAGCTGAGGAAATTGCTGCCAGTGTTTTACTGAATCATAACCAGGTTCGCATTGTGGGAGCTGATGAAGCTAGTCAACAACTGGAGAAAACTGTTGTTCTTGTAAACTTGGTACCCACAGGATCAAGATTTGATGACGCAACAGCATTTTCAATATATAAGAAGTTCTGGCACCGGGAGATCCACACGGATGCTTCCCTTTTTGGTTCCTGTGAAGTACTTTATGTCCATTATCCAGGTCTTCCACCTTCTCCACCTTCAGTTCCCCCAAACATTGATAGCCCATTATTCCCCGGTGATGACAACAATGGAACAATGATGAAACCTTTGGGAGTGGCTATACCGAGGAAAGCAAAGCCAGGGAGTGGAAAAACTATGACTTTAGTAATTGTGCTGTCATCTTTTACAGCTCTTATTATACTTGTTGGATTTGCATGGCTTTGTCTAACGAGATGTGGCCCTTGTGTTCATGAGAGTAAACAAATTCCAAACGCAATTCCATCCTCTTCAAAACTATCAGGGAATGCCAGGTCTTTGACTAATCGAAACATGCCAGGATTTGGTTCAACAACCTTAAGTTCTAGAACAATAACTTATACAGGATCTGCCAAGAGTTTTACTCTGAATGACATAGAGAAAGCAACTAACAACTTTGATGCGTCAAGAATATTAGGAGAAGGGGGCTTTGGGCCTGTTTATAAAGGGGTTCTATATGATGGAAGGGATGTGGCTGTGAAGATTCTCAAGAGAGATGATCAGCGTGGTGGCCGTGAATTCTTAGCAGAAGTTGAGATGCTTAGCCGTCTCCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGCAACAGAGTCGGTGCCTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGTGCCGACAAAGAAACTAATCCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTCGCGCCTTGGCTTATCTGCACGAAGATTCAAATCCATGTGTCATTCATCGGGACTTTAAATCCAGCAACATCTTGTTGGAACATGATTTTACACCCAAGGTTTCAGATTTTGGATTAGCAAGAACTGCCCTGGATGAGGGAAACAAGCACATCTCCACACACGTTATGGGAACATTTGGCTACCTAGCACCAGAATATGCAATGACAGGCCATCTTCTGGTCAAAAGTGACGTTTACAGTTATGGAGTTGTACTTCTTGAGCTCCTAACTGGAAGAAAGCCTGTAGATTTCTCACAACCCCCAGGTCAAGAAAACCTTGTTACTTGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTACAAATGATCATAGACCCGGTTATAAAGCCTGAAATCACTGTTGATTCCGTTGTAAAAGTGGCAGCAATTGCATCAATGTGTATTCAATTGGAAGTCTCCCAACGCCCATTCATGGGTGAAGTTGTTCAGGCTTTGAAGCTGGTATGCAGCGAGCTTGAGGAAACAAGCACAAGAAAATCAAGGAGTTTCCGAGAAGAGGGCCTCCAAACTAAAGTAGATGAACAACCTTCAAGAATTTCAGCTGAGATAGTGGATTTTCCAGATCACGAGACCAAAGTAACATTATCAACGTCAGAGTTTTTCAGCACATCAGGCCAGTGTTTTGAGTCATTCGGGAGGCATTCCACTTCAGGGCCTCTCACTACAGGAAAGAAAAAGCAGTTCTGGCAGAATCTGAGTTTGTCTCGAGGGAGCATGAGTGAGCATGGGTCTTCAGCTCAACGATGGTCTGGTTCTCAGTAA 2079 0.4425 MVSQLACFLCPLVPSPSPGTTPRGSPLRKTKTPPRGPVLGLPPPPPNKDCIWVTCSEPFTYAPPGSPCGCVWPLQVKLRLGISIYKFFPLVSKLAEEIAASVLLNHNQVRIVGADEASQQLEKTVVLVNLVPTGSRFDDATAFSIYKKFWHREIHTDASLFGSCEVLYVHYPGLPPSPPSVPPNIDSPLFPGDDNNGTMMKPLGVAIPRKAKPGSGKTMTLVIVLSSFTALIILVGFAWLCLTRCGPCVHESKQIPNAIPSSSKLSGNARSLTNRNMPGFGSTTLSSRTITYTGSAKSFTLNDIEKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLIGICIEQQSRCLVYELVPNGSVESHLHGADKETNPLDWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWVRPLLTSKEGLQMIIDPVIKPEITVDSVVKVAAIASMCIQLEVSQRPFMGEVVQALKLVCSELEETSTRKSRSFREEGLQTKVDEQPSRISAEIVDFPDHETKVTLSTSEFFSTSGQCFESFGRHSTSGPLTTGKKKQFWQNLSLSRGSMSEHGSSAQRWSGSQ 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5602g00007 692 SUPERFAMILY Protein kinase-like (PK-like) 290 584 IPR011009 -
Pral5602g00007 692 FunFam Receptor-like serine/threonine-protein kinase ALE2 387 602 - -
Pral5602g00007 692 FunFam receptor-like serine/threonine-protein kinase ALE2 284 386 - -
Pral5602g00007 692 Pfam Protein tyrosine and serine/threonine kinase 314 584 IPR001245 GO:0004672|GO:0006468
Pral5602g00007 692 Gene3D Phosphorylase Kinase; domain 1 283 386 - -
Pral5602g00007 692 ProSiteProfiles Protein kinase domain profile. 311 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5602g00007 692 Gene3D Transferase(Phosphotransferase) domain 1 387 611 - -
Pral5602g00007 692 PANTHER OS01G0750732 PROTEIN 42 610 - -
Pral5602g00007 692 MobiDBLite consensus disorder prediction 17 40 - -
Pral5602g00007 692 CDD STKc_IRAK 317 585 - -
Pral5602g00007 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5602g00007 Pral-Chr5602 43835 47133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5602g00007 47 683 Receptor kinase-like Gene Family AT5G56890 58.841 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral5602g00007 PK_Tyr_Ser-Thr 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5602g00007 - - gmx:100814040 969.148