Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5602g00006 ATGGCGCTGGAGCTGTTGTTTTTCCTGATAATTAAGCTACATTTAGTTGTCAGTGCTACACATTTTCATGGATATGAAGGCATCAATCAACACCACTCCAGAAGCCACGCAAGTATTGCTCTTCCCCCAACCAAGTCATCTTATGGAGTTCCTGAAAGTATTGCACTTCCACCTTCTAAGTCATTATCTAAGGCTCCTATAAAGGAACGGACACATGGTTTAGTAGGTCCTCCAATATTACATCATATGCATCACCATTCCAGAAGAAAGTTCAGTAAACCCGCACCAGAGCCAACTTACTCAGTTCATCCACCTGCCTACAGTCATCAAGGTATAGGTCCTTCTGTTTTCCAACCACAACCTCCTATCTCTTCATCAGCAGGCTGGAAATTACCTGCGCCTGCACCATCACCAGCAGGTCTATCAGGCCACTTGAATGTGCCCTCTCCTTCACCGGGAACTACACCTCGGGGTTCGCCATTGAGGAAGACGAAGACTCCACCAAGAGGACCTGTCTTGGGTCTGCCACCTCCACCTCCCAATAAGGACTGTATATGGGTGACTTGCTCAGAGCCCTTCACATATGCACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAGCTTCGCCTTGGTATTTCAATATACAAGTTCTTTCCTTTGGTCTCGAAGCTAGCTGAGGAAATTGCTGCCAGTGTTTTACTGAATCATAACCAGGTTCGCATTGTGGGAGCTGATGAAGCTAGTCAACAACTGGAGAAAACTGTTGTTCTTGTAAACTTGGTACCCACAGGATCAAGATTTGATGACGCAACAGCATTTTCAATATATAAGAAGTTCTGGCACCGGGAGATCCACACGGATGCTTCCCTTTTTGGTTCCTGTGAAGTACTTTATGTCCATTATCCAGGTCTTCCACCTTCTCCACCTTCAGTTCCCCCAAACATTGATAGCCCATTATTCCCCGGTGATGACAACAATGGAACAATGATGAAACCTTTGGGAGTGGCTATACCGAGGAAAGCAAAGCCAGGGAGTGGAAAAACTATGACTTTAGTAATTGTGCTGTCATCTTTTACAGCTCTTATTATACTTGTTGGATTTGCATGGCTTTGTCTAACGAGATGTGGCCCTTGTGTTCATGAGAGTAAACAAATTCCAAACGCAATTCCATCCTCTTCAAAACTATCAGGGAATGCCAGGTCTTTGACTAATCGAAACATGCCAGGATTTGGTTCAACAACCTTAAGTTCTAGAACAATAACTTATACAGGATCTGCCAAGAGTTTTACTCTGAATGACATAGAGAAAGCAACTAACAACTTTGATGCGTCAAGAATATTAGGAGAAGGGGGCTTTGGGCCTGTTTATAAAGGGGTTCTATATGATGGAAGGGATGTGGCTGTGAAGATTCTCAAGAGAGATGATCAGCGTGGTGGCCGTGAATTCTTAGCAGAAGTTGAGATGCTTAGCCGTCTCCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGCAACAGAGTCGGTGCCTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGTGCCGACAAAGAAACTAATCCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTCGCGCCTTGGCTTATCTGCACGAAGATTCAAATCCATGTGTCATTCATCGGGACTTTAAATCCAGCAACATCTTGTTGGAACATGATTTTACACCCAAGGTTTCAGATTTTGGATTAGCAAGAACTGCCCTGGATGAGGGAAACAAGCACATCTCCACACACGTTATGGGAACATTTGGCTACCTAGCACCAGAATATGCAATGACAGGCCATCTTCTGGTCAAAAGTGACGTTTACAGTTATGGAGTTGTACTTCTTGAGCTCCTAACTGGAAGAAAGCCTGTAGATTTCTCACAACCCCCAGGTCAAGAAAACCTTGTTACTTGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTACAAATGATCATAGACCCGGTTATAAAGCCTGAAATCACTGTTGATTCCGTTGTAAAAGTGGCAGCAATTGCATCAATGTGTATTCAATTGGAAGTCTCCCAACGCCCATTCATGGGTGAAGTTGTTCAGGCTTTGAAGCTGGTATGCAGCGAGCTTGAGGAAACAAGCACAAGAAAATCAAGGAGTTTCCGAGAAGAGGGCCTCCAAACTAAAGTAGATGAACAACCTTCAAGAATTTCAGCTGAGATAGTGGATTTTCCAGATCACGAGACCAAAGTAACATTATCAACGTCAGAGTTTTTCAGCACATCAGGCCAGTGTTTTGAGTCATTCGGGAGGCATTCCACTTCAGGGCCTCTCACTACAGGAAAGAAAAAGCAGTTCTGGCAGAATCTGAGTTTGTCTCGAGGGAGCATGAGTGAGCATGGGTCTTCAGCTCAACGATGGTCTGGTTCTCAGTAA 2481 0.4438 MALELLFFLIIKLHLVVSATHFHGYEGINQHHSRSHASIALPPTKSSYGVPESIALPPSKSLSKAPIKERTHGLVGPPILHHMHHHSRRKFSKPAPEPTYSVHPPAYSHQGIGPSVFQPQPPISSSAGWKLPAPAPSPAGLSGHLNVPSPSPGTTPRGSPLRKTKTPPRGPVLGLPPPPPNKDCIWVTCSEPFTYAPPGSPCGCVWPLQVKLRLGISIYKFFPLVSKLAEEIAASVLLNHNQVRIVGADEASQQLEKTVVLVNLVPTGSRFDDATAFSIYKKFWHREIHTDASLFGSCEVLYVHYPGLPPSPPSVPPNIDSPLFPGDDNNGTMMKPLGVAIPRKAKPGSGKTMTLVIVLSSFTALIILVGFAWLCLTRCGPCVHESKQIPNAIPSSSKLSGNARSLTNRNMPGFGSTTLSSRTITYTGSAKSFTLNDIEKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLIGICIEQQSRCLVYELVPNGSVESHLHGADKETNPLDWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWVRPLLTSKEGLQMIIDPVIKPEITVDSVVKVAAIASMCIQLEVSQRPFMGEVVQALKLVCSELEETSTRKSRSFREEGLQTKVDEQPSRISAEIVDFPDHETKVTLSTSEFFSTSGQCFESFGRHSTSGPLTTGKKKQFWQNLSLSRGSMSEHGSSAQRWSGSQ 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5602g00006 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Pral5602g00006 826 MobiDBLite consensus disorder prediction 77 177 - -
Pral5602g00006 826 CDD STKc_IRAK 451 719 - -
Pral5602g00006 826 Gene3D Transferase(Phosphotransferase) domain 1 521 745 - -
Pral5602g00006 826 Pfam Protein tyrosine and serine/threonine kinase 448 718 IPR001245 GO:0004672|GO:0006468
Pral5602g00006 826 PANTHER OS01G0750732 PROTEIN 176 744 - -
Pral5602g00006 826 FunFam receptor-like serine/threonine-protein kinase ALE2 418 520 - -
Pral5602g00006 826 MobiDBLite consensus disorder prediction 147 161 - -
Pral5602g00006 826 Gene3D Phosphorylase Kinase; domain 1 417 520 - -
Pral5602g00006 826 ProSiteProfiles Protein kinase domain profile. 445 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5602g00006 826 SUPERFAMILY Protein kinase-like (PK-like) 424 718 IPR011009 -
Pral5602g00006 826 FunFam Receptor-like serine/threonine-protein kinase ALE2 521 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5602g00006 Pral-Chr5602 43835 48814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5602g00006 181 817 Receptor kinase-like Gene Family AT5G56890 58.841 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral5602g00006 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5602g00006 - - gmx:100814040 1103.2