Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5602g00004 ATGGCGCTGGAGCTGTTGTTTTTCCTGATAATTAAGCTACATTTAGTTGTCAGTGCTACACATTTTCATGGATATGAAGGCATCAATCAACACCACTCCAGAAGCCACGCAAGTATTGCTCTTCCCCCAACCAAGTCATCTTATGGAGTTCCTGAAAGTATTGCACTTCCACCTTCTAAGTCATTATCTAAGGCTCCTATAAAGGAACGGACACATGGTTTAGTAGGTCCTCCAATATTACATCATATGCATCACCATTCCAGAAGAAAGTTCAGTAAACCCGCACCAGAGCCAACTTACTCAGTTCATCCACCTGCCTACAGTCATCAAGGTCCTTCTGTTTTCCAACCACAACCTCCTATCTCTTCATCAGCAGGCTGGAAATTACCTGCGCCTGCACCATCACCAGCAGGTCTATCAGGCCACTTGAATGTGCCCTCTCCTTCACCGGGAACTACACCTCGGGGTTCGCCATTGAGGAAGACGAAGACTCCACCAAGAGGACCTGTCTTGGGTCTGCCACCTCCACCTCCCAATAAGGACTGTATATGGGTGACTTGCTCAGAGCCCTTCACATATGCACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAGCTTCGCCTTGGTATTTCAATATACAAGTTCTTTCCTTTGGTCTCGAAGCTAGCTGAGGAAATTGCTGCCAGTGTTTTACTGAATCATAACCAGGTTCGCATTGTGGGAGCTGATGAAGCTAGTCAACAACTGGAGAAAACTGTTGTTCTTGTAAACTTGGTACCCACAGGATCAAGATTTGATGACGCAACAGCATTTTCAATATATAAGAAGTTCTGGCACCGGGAGATCCACACGGATGCTTCCCTTTTTGGTTCCTGTGAAGTACTTTATGTCCATTATCCAGGTCTTCCACCTTCTCCACCTTCAGTTCCCCCAAACATTGATAGCCCATTATTCCCCGGTGATGACAACAATGGAACAATGATGAAACCTTTGGGAGTGGCTATACCGAGGAAAGCAAAGCCAGGGAGTGGAAAAACTATGACTTTAGTAATTGTGCTGTCATCTTTTACAGCTCTTATTATACTTGTTGGATTTGCATGGCTTTGTCTAACGAGATGTGGCCCTTGTGTTCATGAGAGTAAACAAATTCCAAACGCAATTCCATCCTCTTCAAAACTATCAGGGAATGCCAGGTCTTTGACTAATCGAAACATGCCAGGATTTGGTTCAACAACCTTAAGTTCTAGAACAATAACTTATACAGGATCTGCCAAGAGTTTTACTCTGAATGACATAGAGAAAGCAACTAACAACTTTGATGCGTCAAGAATATTAGGAGAAGGGGGCTTTGGGCCTGTTTATAAAGGGGTTCTATATGATGGAAGGGATGTGGCTGTGAAGATTCTCAAGAGAGATGATCAGCGTGGTGGCCGTGAATTCTTAGCAGAAGTTGAGATGCTTAGCCGTCTCCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGCAACAGAGTCGGTGCCTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGTGCCGACAAAGAAACTAATCCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTCGCGCCTTGGCTTATCTGCACGAAGATTCAAATCCATGTGTCATTCATCGGGACTTTAAATCCAGCAACATCTTGTTGGAACATGATTTTACACCCAAGGTTTCAGATTTTGGATTAGCAAGAACTGCCCTGGATGAGGGAAACAAGCACATCTCCACACACGTTATGGGAACATTTGGCTACCTAGCACCAGAATATGCAATGACAGGCCATCTTCTGGTCAAAAGTGACGTTTACAGTTATGGAGTTGTACTTCTTGAGCTCCTAACTGGAAGAAAGCCTGTAGATTTCTCACAACCCCCAGGTCAAGAAAACCTTGTTACTTGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTACAAATGATCATAGACCCGGTTATAAAGCCTGAAATCACTGTTGATTCCGTTGTAAAAGTGGCAGCAATTGCATCAATGTGTATTCAATTGGAAGTCTCCCAACGCCCATTCATGGGTGAAGTTGTTCAGGCTTTGAAGCTGGTATGCAGCGAGCTTGAGGAAACAAGCACAAGAAAATCAAGGAGTTTCCGAGAAGAGGGCCTCCAAACTAAAGTAGATGAACAACCTTCAAGAATTTCAGCTGAGATAGTGGATTTTCCAGATCACGAGACCAAAGTAACATTATCAACGTCAGAGTTTTTCAGCACATCAGGCCAGTGTTTTGAGTCATTCGGGAGGCATTCCACTTCAGGGCCTCTCACTACAGGAAAGAAAAAGCAGTTCTGGCAGAATCTGAGTTTGTCTCGAGGGAGCATGAGTGAGCATGGGTCTTCAGCTCAACGATGGTCTGGTTCTCAGTAA 2475 0.444 MALELLFFLIIKLHLVVSATHFHGYEGINQHHSRSHASIALPPTKSSYGVPESIALPPSKSLSKAPIKERTHGLVGPPILHHMHHHSRRKFSKPAPEPTYSVHPPAYSHQGPSVFQPQPPISSSAGWKLPAPAPSPAGLSGHLNVPSPSPGTTPRGSPLRKTKTPPRGPVLGLPPPPPNKDCIWVTCSEPFTYAPPGSPCGCVWPLQVKLRLGISIYKFFPLVSKLAEEIAASVLLNHNQVRIVGADEASQQLEKTVVLVNLVPTGSRFDDATAFSIYKKFWHREIHTDASLFGSCEVLYVHYPGLPPSPPSVPPNIDSPLFPGDDNNGTMMKPLGVAIPRKAKPGSGKTMTLVIVLSSFTALIILVGFAWLCLTRCGPCVHESKQIPNAIPSSSKLSGNARSLTNRNMPGFGSTTLSSRTITYTGSAKSFTLNDIEKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLIGICIEQQSRCLVYELVPNGSVESHLHGADKETNPLDWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWVRPLLTSKEGLQMIIDPVIKPEITVDSVVKVAAIASMCIQLEVSQRPFMGEVVQALKLVCSELEETSTRKSRSFREEGLQTKVDEQPSRISAEIVDFPDHETKVTLSTSEFFSTSGQCFESFGRHSTSGPLTTGKKKQFWQNLSLSRGSMSEHGSSAQRWSGSQ 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5602g00004 824 MobiDBLite consensus disorder prediction 145 159 - -
Pral5602g00004 824 FunFam receptor-like serine/threonine-protein kinase ALE2 416 518 - -
Pral5602g00004 824 SUPERFAMILY Protein kinase-like (PK-like) 422 716 IPR011009 -
Pral5602g00004 824 Gene3D Phosphorylase Kinase; domain 1 415 518 - -
Pral5602g00004 824 Gene3D Transferase(Phosphotransferase) domain 1 519 743 - -
Pral5602g00004 824 MobiDBLite consensus disorder prediction 72 175 - -
Pral5602g00004 824 ProSiteProfiles Protein kinase domain profile. 443 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5602g00004 824 FunFam Receptor-like serine/threonine-protein kinase ALE2 519 734 - -
Pral5602g00004 824 CDD STKc_IRAK 449 717 - -
Pral5602g00004 824 Pfam Protein tyrosine and serine/threonine kinase 446 716 IPR001245 GO:0004672|GO:0006468
Pral5602g00004 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Pral5602g00004 824 PANTHER OS01G0750732 PROTEIN 174 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5602g00004 Pral-Chr5602 43835 49060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5602g00004 179 815 Receptor kinase-like Gene Family AT5G56890 58.841 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral5602g00004 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5602g00004 - - gmx:100814040 1108.2