Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5602g00001 ATGGGAATGTCAAAGAGTTTCTTCTCTTCTCTTGTAGGTTGTCTGGTTTTTGCAGTTCTGGTTCAATCTCAGGATCAATCAGAATTCATAAGCATTGATTGTGGGGCACCTGCCAACTCCAACTACATTGAGGGGACGACAGGCATAAATTACATATCCGATGACAAGTTCATAAATTCTGGAGTGAGTTACTCCGTAGCCAGTGATATCAAAAGTAAGTATCAACAGCAAATTTGGAACCTGAGAAGCTTTCCTCAAGGAACAAGAAACTGTTACAATATAAACATCACAAATGGCTCTAAATATCTGATCAGGGCTATTTTTGTGCATGGGAATTATGATAGACAGAATAAGTTACCAAGTTTTGATCTTCATCTTGGGCCTAGCTTGTGGCAAACAGTGGAAATAACCAATCCATCATCTGAAGTAAGCCCTGAGATCATACATGTTCCATTACGAGATTACATTCAGATCTGTCTGGTTGACACAGGCTCCGGAACCCCATTTGTCTCTGCTATAGAATTAAGGACTTTGGCCAACAATATTTATGACACTCACTCAGGATTCTTGTCACTTTACAAGAGGTTGGATTTAGGCTCAACCAGCAATAAAACATACAGGTATAATGATGATGGTTATGATCGCTTCTGGTCAAGTCAAGTCTACTACCCGGCCTGGTCGCGAATAAGTGCTTCAATTTCTGCAGAATCCTTGGGTCAAAATCATTACAAACCACCGGCCATTGTTATGAGTAATGCAGCCACACCAGTAAATGAGAGTGCTCCAATGTTAGTGCAGTGGGAGCCCGCGAATGCAACAGACCAATTCTATGTTTACATGCATTTTGCAGAGCTTCAAGTCTTAGAAAATAATCAGACAAGATCCTTCACCATTACCCTCAATGGCGATCTCTTTAGTGCTAATGTTGTACCTGTATTCAAAGGCACGACCACTGTATTCAGCAAAAAAGCTGCCCGCGGAGAAATAATTATGTTTTCACTTCAGAAGACTGATAATTCAACCCTCCCTCCCATTCTCAACGCTATTGAAGTTTATACATTTAAAGAGTTTTCACAATCAGAAACAGAACAAGGAGATGTTGATGCAATCTCAACAATCAAATCTTCTTATGAGGTAACAAGAAACTGGCAAGGCGATCCATGTGGTCCTATGGCCTACATTTGGGAAGGTCTAAACTGTACTTATAATGGCCTGAATTCCCCAAGAATCACAGCCCTGAATTTGTCCTCGAGTGGATTGATAGGGCAGATAGATCCGTCCATCTCAAAGCTCACCATGCTAGAGAAGTTGGATTTATCAAACAATTCCTTAAGTGGACCAGTGCCTAATTTTTTGTCTCAACTACGAAAATTGGAGATCCTAACCCTGGACGGCAACAACTTCACGGGTACAGTTCCCTCTGATCTGGTTGAAAAGTCGAAGAAAGGTTCCCTATCCCTAAGTTTTGGACAAAATCCATATCTATGTGAATCTGCTTCGTGCAACAACAAGAAAAAGAACAACACTACTATTCCCGTAGTAGTGTCAATTGTTGGAACTCTATTCCTTCTGGTAGCCGCGGTAATCATATTTTTTACCCTTAAAAGGCGAAAACAAAGAGGAACAGGTCCAATTGAGATCTCACAGCAATTTGAAAAAGTTGAAGAACCAAAAGACACATCTCTGCAAGTCATCAATAGACAATACTCATACTATGATGTCCTCAAAATGACCAATAACTTCAGTACAATTCTCGGAAAAGGTGGGTTTGGAACAGTTTATTTGGGTTACATCGAGGAAACTCCTGTAGCAGTTAAAATGCTCTCTTCCTCATCAGTTCAAGGCTATCAGCAATTCCAAGCCGAGGTTAAACTTTTATTGAGAGTCCATCACAGAAATCTTACTTCCCTTTTTGGGTATTGCAATGATGAAACCAACAAGGGGCTCATATATGAGTACATGGCTAATGGTAACTTACAAGAGTACCTTTCAGGAAAAAGTAGCAGATCAAAGTTCTTGACTTGGGAAGACAGACTTTGTATAGCACTGGACGCAGCACTAGGCTTAGAGTACTTGCATAATGGATGTAAGCCCCCTATAATCCACAGAGATGTAAAATCTTCAAACATCTTGCTGAATGAAAACTTCAGAGCAAAAGTAGCAGACTTTGGTCTATCTAAAATCATTCCAACTGATGATGAAACTCATGTGTCAACTGTTGTTGCAGGTACTCCTGGTTATATAGACCTTGAGTACTACATAACAAACAGATTGACGGAGAAAAGTGATGTCCATAGCTTTGGAGTTGTTCTTTTTGAAATAATCACAAGCCTACCAGTCATATCATGA 2349 0.4014 MGMSKSFFSSLVGCLVFAVLVQSQDQSEFISIDCGAPANSNYIEGTTGINYISDDKFINSGVSYSVASDIKSKYQQQIWNLRSFPQGTRNCYNINITNGSKYLIRAIFVHGNYDRQNKLPSFDLHLGPSLWQTVEITNPSSEVSPEIIHVPLRDYIQICLVDTGSGTPFVSAIELRTLANNIYDTHSGFLSLYKRLDLGSTSNKTYRYNDDGYDRFWSSQVYYPAWSRISASISAESLGQNHYKPPAIVMSNAATPVNESAPMLVQWEPANATDQFYVYMHFAELQVLENNQTRSFTITLNGDLFSANVVPVFKGTTTVFSKKAARGEIIMFSLQKTDNSTLPPILNAIEVYTFKEFSQSETEQGDVDAISTIKSSYEVTRNWQGDPCGPMAYIWEGLNCTYNGLNSPRITALNLSSSGLIGQIDPSISKLTMLEKLDLSNNSLSGPVPNFLSQLRKLEILTLDGNNFTGTVPSDLVEKSKKGSLSLSFGQNPYLCESASCNNKKKNNTTIPVVVSIVGTLFLLVAAVIIFFTLKRRKQRGTGPIEISQQFEKVEEPKDTSLQVINRQYSYYDVLKMTNNFSTILGKGGFGTVYLGYIEETPVAVKMLSSSSVQGYQQFQAEVKLLLRVHHRNLTSLFGYCNDETNKGLIYEYMANGNLQEYLSGKSSRSKFLTWEDRLCIALDAALGLEYLHNGCKPPIIHRDVKSSNILLNENFRAKVADFGLSKIIPTDDETHVSTVVAGTPGYIDLEYYITNRLTEKSDVHSFGVVLFEIITSLPVIS 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5602g00001 782 SUPERFAMILY Protein kinase-like (PK-like) 559 779 IPR011009 -
Pral5602g00001 782 Gene3D Phosphorylase Kinase; domain 1 561 653 - -
Pral5602g00001 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Pral5602g00001 782 ProSiteProfiles Protein kinase domain profile. 579 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5602g00001 782 FunFam Leucine-rich repeat receptor-like kinase 366 498 - -
Pral5602g00001 782 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Pral5602g00001 782 Gene3D Ribonuclease Inhibitor 367 487 IPR032675 -
Pral5602g00001 782 PANTHER OS07G0107800 PROTEIN-RELATED 30 781 - -
Pral5602g00001 782 FunFam Leucine-rich repeat receptor-like protein kinase 552 653 - -
Pral5602g00001 782 SMART serkin_6 579 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5602g00001 782 Pfam Protein tyrosine and serine/threonine kinase 582 776 IPR001245 GO:0004672|GO:0006468
Pral5602g00001 782 Gene3D Transferase(Phosphotransferase) domain 1 654 782 - -
Pral5602g00001 782 ProSitePatterns Protein kinases ATP-binding region signature. 585 606 IPR017441 GO:0005524
Pral5602g00001 782 Pfam Malectin-like domain 32 353 IPR024788 -
Pral5602g00001 782 SUPERFAMILY L domain-like 371 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5602g00001 Pral-Chr5602 25907 30364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5602g00001 1 781 Receptor kinase-like Gene Family AT1G51800 49.687 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral5602g00001 Malectin_like 3.2e-114 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5602g00001 - - qsa:O6P43_027684 1001.89