Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral55g00001 ATGGAGTCCGGGGCTGGGGATACCGATGCATCTCGGATTCTTGCTGAACTTGAGTCGTTGAGGGAGGCAAAGAGTGTTATAGAGCAAAGAATTTCTGTACTTGAGGGTCAACTCCACGATATTAATCTCCGCAATGACGTATCGAACTGCGACTCGTGCTCTCCTACCTCCGTTCTCAATTCGAGCTCCGCGAACGGATTGTCCCCGGATATGATTTACAGATACAGCCGCCAGCTGTTGCTTCCTTCTTTCGGCGTTGAAGGGCAGGCAAATCTCTTGAAGTCATCCATTTTAGTCGTGGGAGCTGGAGGCTTGGGTTCTCCTGCCTTGTTATACCTTGCGGCTTCTGGGGTTGGTCGGCTGGGTATTGTTGACCATGACCTTGTTGAGCTGAATAATATGCACAGGCAGGTAATTCACACTGAATCATATATTGGTCAGCCAAAAGTGAAATCTGCTGCTGCTGCTTGTCACAAGATCAACTCCACCATTCAAATTGTGGAACACAAAGAAGCTTTGCGGGCTACCAATGCATTACAAATTCTGAACCAATATGACATAATAATAGACGCAACAGATAATGCTCCAAGCCGCTACATGATCAGTGATTGCTGTGTAGTTTTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGTTTGGAAGGCCAGCTCACTGTCTACAATTACAAGGGTGGTCCATGCTATCGATGTTTATTTCCAACTCCTCCACCTGCTACAGCTTGTCAAAGGTGTGCTGATAGTGGAGTTCTAGGTGTAGTTCCTGGTGTTATTGGTTGTCTCCAAGCTTTAGAGGCCATCAAGATTGCTGGTGCTGTGGGCGAATCACTCTCTGGAAGGATGATTCTCTTTGATGCTTTGTCTGCACGGATCCGTATTGTAAAAATTAGGGGAAGGTCTTTGCAATGTGAAGTTTGTGGAGAGAATTCAACATTCACTCAACAGCACTTTCAAGAATTTGATTATGAGAAATTCACTCAGACTCCATTGACTGTGTCACCATTGAAGCTGAACCTTCTTCCTGTGGAATCAAGAATTAGCAGCAAGCAATACGGTGAAATAATTAGTAAGAAAGAGCCACATGTGCTGGTGGATGTGAGACCAACTCACCATTTCAAAATTGTGTCCCTTCCAAAGTCCTTGAACATCCCACTTTCAACCTTGGAGGCCAGGTTGCCGGAAATATCCTCGGCTATAAAGAAAGAAGAGGACAACGTTGGTGTAGCTTCTGGTTCAAGCGTGCAATTGTATGTCGTATGTCGAAGGGGAAATGATTCTCAGCTAGCAGTTCAGTATCTTCAGAAGATGGGTTTTGCTTCTGCCAAGGACATTATGGGGGGCCTGGAATCTTGGTCCAAGGATGTGGACCCAAACTTCGCTTCATATTAG 1407 0.457 MESGAGDTDASRILAELESLREAKSVIEQRISVLEGQLHDINLRNDVSNCDSCSPTSVLNSSSANGLSPDMIYRYSRQLLLPSFGVEGQANLLKSSILVVGAGGLGSPALLYLAASGVGRLGIVDHDLVELNNMHRQVIHTESYIGQPKVKSAAAACHKINSTIQIVEHKEALRATNALQILNQYDIIIDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPATACQRCADSGVLGVVPGVIGCLQALEAIKIAGAVGESLSGRMILFDALSARIRIVKIRGRSLQCEVCGENSTFTQQHFQEFDYEKFTQTPLTVSPLKLNLLPVESRISSKQYGEIISKKEPHVLVDVRPTHHFKIVSLPKSLNIPLSTLEARLPEISSAIKKEEDNVGVASGSSVQLYVVCRRGNDSQLAVQYLQKMGFASAKDIMGGLESWSKDVDPNFASY 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral55g00001 468 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 71 380 IPR045886 -
Pral55g00001 468 Coils Coil 391 411 - -
Pral55g00001 468 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 17 468 IPR028885 GO:0002143|GO:0004792|GO:0005829
Pral55g00001 468 FunFam Adenylyltransferase and sulfurtransferase MOCS3 350 468 - -
Pral55g00001 468 Pfam ThiF family 75 310 IPR000594 -
Pral55g00001 468 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 67 435 IPR035985 GO:0008641
Pral55g00001 468 SMART rhod_4 353 463 IPR001763 -
Pral55g00001 468 Coils Coil 10 37 - -
Pral55g00001 468 CDD ThiF_MoeB_HesA_family 74 302 - -
Pral55g00001 468 Pfam Rhodanese-like domain 355 459 IPR001763 -
Pral55g00001 468 Gene3D - 350 468 IPR036873 -
Pral55g00001 468 FunFam Adenylyltransferase and sulfurtransferase MOCS3 68 317 - -
Pral55g00001 468 Gene3D - 69 319 - -
Pral55g00001 468 ProSiteProfiles Rhodanese domain profile. 363 466 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral55g00001 Pral-Chr55 4715 17962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral55g00001 118 468 Sulfurtransferasese or Rhodanese AT5G55130 71.591 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral55g00001 K11996 - pcin:129303097 854.358